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@PotoyanGroup

PotoyanGroup

Computational biophysics group at Iowa State University.

Popular repositories Loading

  1. Seq2Ensemble Seq2Ensemble Public

    Seq2Ensemble: Collection of Colab based notebooks for facilitating conformational ensemble generation

    Jupyter Notebook 6 1

  2. StochStemCell StochStemCell Public

    C++ code of PDMP simulations used in the paper "A stochastic and dynamical view of pluripotency in mouse embryonic stem cells" by YT Lin, PG Hufton, EY Lee and DA Potoyan PLoS Comp Bio (2018) 14, 1…

    C++

  3. openawsem openawsem Public

    Forked from npschafer/openawsem

    An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM

    Python 1

  4. Temp-sens-contacts Temp-sens-contacts Public

    Forked from Dan-Burns/ChACRA

    Tools to analyze biomolecular interactions.

    Python

  5. ChACRA ChACRA Public

    Forked from Dan-Burns/ChACRA

    Reveal protein energy centers.

    Python

Repositories

Showing 5 of 5 repositories
  • ChACRA Public Forked from Dan-Burns/ChACRA

    Reveal protein energy centers.

    PotoyanGroup/ChACRA’s past year of commit activity
    Python 0 MIT 2 0 0 Updated Dec 24, 2024
  • openawsem Public Forked from npschafer/openawsem

    An implementation of the AWSEM coarse-grained protein folding forcefield in OpenMM

    PotoyanGroup/openawsem’s past year of commit activity
    Python 0 MIT 23 0 0 Updated Apr 11, 2024
  • Seq2Ensemble Public

    Seq2Ensemble: Collection of Colab based notebooks for facilitating conformational ensemble generation

    PotoyanGroup/Seq2Ensemble’s past year of commit activity
    Jupyter Notebook 6 1 1 0 Updated Jun 14, 2023
  • Temp-sens-contacts Public Forked from Dan-Burns/ChACRA

    Tools to analyze biomolecular interactions.

    PotoyanGroup/Temp-sens-contacts’s past year of commit activity
    Python 0 2 0 0 Updated Sep 16, 2022
  • StochStemCell Public

    C++ code of PDMP simulations used in the paper "A stochastic and dynamical view of pluripotency in mouse embryonic stem cells" by YT Lin, PG Hufton, EY Lee and DA Potoyan PLoS Comp Bio (2018) 14, 1006000

    PotoyanGroup/StochStemCell’s past year of commit activity
    C++ 0 0 0 0 Updated Oct 31, 2018

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