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Plant-Food-Research-Open · Aug 19, 2024 · 402063d · 402063d
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diff --git a/README.md b/README.md
@@ -2,7 +2,7 @@
 
 [![Lint/stub on Linux/Docker](https://github.com/PlantandFoodResearch/genepal/actions/workflows/test.yml/badge.svg)](https://github.com/PlantandFoodResearch/genepal/actions/workflows/test.yml)
 
-A NextFlow pipeline for pan-genome annotation. It can also be used for annotation of a single genome.
+A NextFlow pipeline for single genome and pan-genome annotation.
 
 ## Flowchart
 

diff --git a/docs/parameters.md b/docs/parameters.md
@@ -1,6 +1,6 @@
 # plantandfoodresearch/genepal pipeline parameters
 
-A NextFlow pipeline for pan-genome annotation
+A NextFlow pipeline for single genome and pan-genome annotation
 
 ## Input/output options
 

diff --git a/nextflow.config b/nextflow.config
@@ -94,10 +94,10 @@ trace {
 }
 
 manifest {
-    name                        = 'pangene'
+    name                        = 'genepal'
     author                      = """Usman Rashid, Jason Shiller"""
-    homePage                    = 'https://github.com/PlantandFoodResearch/pangene'
-    description                 = """A NextFlow pipeline for pan-genome annotation"""
+    homePage                    = 'https://github.com/PlantandFoodResearch/genepal'
+    description                 = """A NextFlow pipeline for single genome and pan-genome annotation"""
     mainScript                  = 'main.nf'
     nextflowVersion             = '!>=23.04.4'
     version                     = '0.4.0+dev'

diff --git a/nextflow_schema.json b/nextflow_schema.json
@@ -2,7 +2,7 @@
     "$schema": "http://json-schema.org/draft-07/schema",
     "$id": "https://raw.githubusercontent.com/plantandfoodresearch/genepal/master/nextflow_schema.json",
     "title": "plantandfoodresearch/genepal pipeline parameters",
-    "description": "A NextFlow pipeline for pan-genome annotation",
+    "description": "A NextFlow pipeline for single genome and pan-genome annotation",
     "type": "object",
     "definitions": {
         "input_output_options": {