Skip to content

Commit

Permalink
Merge pull request easybuilders#19274 from GrahamDB/20231120174209_ne…
Browse files Browse the repository at this point in the history
…w_pr_VSEARCH2250

{bio}[GCC/12.3.0] VSEARCH v2.25.0
  • Loading branch information
verdurin authored Nov 21, 2023
2 parents a251edc + 5f43f49 commit 0a601a5
Showing 1 changed file with 40 additions and 0 deletions.
40 changes: 40 additions & 0 deletions easybuild/easyconfigs/v/VSEARCH/VSEARCH-2.25.0-GCC-12.3.0.eb
Original file line number Diff line number Diff line change
@@ -0,0 +1,40 @@
easyblock = 'ConfigureMake'

name = 'VSEARCH'
version = '2.25.0'

homepage = 'https://github.com/torognes/vsearch'
description = """VSEARCH supports de novo and reference based chimera detection,
clustering, full-length and prefix dereplication, rereplication,
reverse complementation, masking, all-vs-all pairwise global alignment,
exact and global alignment searching, shuffling, subsampling and sorting.
It also supports FASTQ file analysis, filtering,
conversion and merging of paired-end reads."""

toolchain = {'name': 'GCC', 'version': '12.3.0'}

source_urls = ['https://github.com/torognes/vsearch/archive']
sources = ['v%(version)s.tar.gz']
checksums = ['b7e25638924e56591d7c6ac3a959795000439937f5b566be7f06457bb31f91a9']

builddependencies = [
('Autotools', '20220317'),
]

dependencies = [
('zlib', '1.2.13'),
('bzip2', '1.0.8'),
]

preconfigopts = './autogen.sh &&'

configopts = '--disable-pdfman '

sanity_check_paths = {
'files': ['bin/vsearch'],
'dirs': [],
}

sanity_check_commands = ['vsearch --help']

moduleclass = 'bio'

0 comments on commit 0a601a5

Please sign in to comment.