Skip to content

Curation of BIDS (CuBIDS): A sanity-preserving software package for processing BIDS datasets.

License

Notifications You must be signed in to change notification settings

PennLINC/CuBIDS

This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.

Folders and files

NameName
Last commit message
Last commit date

Latest commit

4673aec · Feb 1, 2024
Feb 1, 2024
Jan 31, 2024
Feb 1, 2024
Jan 25, 2024
Mar 29, 2022
Jan 12, 2024
Jan 12, 2024
Jan 30, 2024
Jan 12, 2024
Jan 30, 2024
Jan 30, 2024
Oct 6, 2020
Jun 29, 2021
Jun 29, 2021
Jan 30, 2024
Nov 16, 2020
Feb 1, 2024

Repository files navigation

CuBIDS: Curation of BIDS

https://circleci.com/gh/PennLINC/CuBIDS.svg?style=svg Documentation Status

About

Curation of BIDS, or CuBIDS, is a workflow and software package designed to facilitate reproducible curation of neuroimaging BIDS datasets. CuBIDS breaks down BIDS dataset curation into four main components and addresses each one using various command line programs complete with version control capabilities. These components are not necessarily linear but all are critical in the process of preparing BIDS data for successful preprocessing and analysis pipeline runs.

  1. CuBIDS facilitates the validation of BIDS data.
  2. CuBIDS visualizes and summarizes the heterogeneity in a BIDS dataset.
  3. CuBIDS helps users test pipelines on the entire parameter space of a BIDS dataset.
  4. CuBIDS allows users to perform metadata-based quality control on their BIDS data.

https://github.com/PennLINC/CuBIDS/raw/main/docs/_static/cubids_workflow.png

For full documentation, please visit our ReadTheDocs