copy files from json

copy_files_from_json.py

@@ -0,0 +1,19 @@
+import json
+import os
+import shutil
+
+def main():
+    keys_list = ['IMAGE', 'LABEL']
+    paths_out_list = ['/home/GRAMES.POLYMTL.CA/p118739/data/datasets/article-totalspineseg/canal-eval/raw', '/home/GRAMES.POLYMTL.CA/p118739/data/datasets/article-totalspineseg/canal-eval/gt']
+    path_json = '/home/GRAMES.POLYMTL.CA/p118739/data/config_data/canal-seg/dcm-oklahoma-brno_sci-paris.json'
+
+    with open(path_json, "r") as file:
+        config_data = json.load(file)
+
+    for dic in config_data['TESTING']:
+        for i, key in enumerate(keys_list):
+            img_path = os.path.join(config_data['DATASETS_PATH'], dic[key])
+            shutil.copy2(img_path, paths_out_list[i])
+
+if __name__=='__main__':
+    main()