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Update MOM6 and COBALT tags, all the parameter docs, and turn off glorys GHA for now #19

Update MOM6 and COBALT tags, all the parameter docs, and turn off glorys GHA for now

Update MOM6 and COBALT tags, all the parameter docs, and turn off glorys GHA for now #19

Workflow file for this run

name: mom6_tide_2d
on:
push:
branches: [ "main" ]
pull_request:
branches: [ "main" ]
workflow_dispatch:
jobs:
build:
runs-on: ubuntu-latest
# container:
# image: noaaepic/ubuntu22.04-intel-llvm-unified:v1.8.0
# options: --user=root
# env:
# PR_NUMBER: ${{ github.event.number }}
steps:
- name: Checkout
uses: actions/checkout@v4
with:
fetch-depth: 1
submodules: recursive
- name: Clean up disk space
run: |
echo "maximize disk space on git-runner ..."
df -h
sudo apt-get clean
sudo rm -rf /var/lib/apt/lists/* /tmp/* ~/.cache
sudo rm -rf /usr/share/dotnet
sudo rm -rf /opt/ghc
sudo rm -rf "/usr/local/share/boost"
sudo rm -rf "$AGENT_TOOLSDIRECTORY"
docker system prune -af
df -h
- name: Set up Docker
uses: docker/setup-buildx-action@v3
- name: Download Image
run: |
echo "Pull the Image ..."
docker pull noaaepic/ubuntu22.04-intel-llvm-unified:v1.8.0
docker images
df -h
- name: running Doker
run: |
echo "Run Docker Image ..."
pwd
docker run --rm \
-v ${{ github.workspace }}:/workspace \
-w /workspace \
noaaepic/ubuntu22.04-intel-llvm-unified:v1.8.0 \
sh -c "cd builds/;
./linux-build.bash -m docker -p linux-intel -t repro -f mom6solo;
cd ../exps;
wget -q ftp.gfdl.noaa.gov:/pub/Yi-cheng.Teng/nwa12_tideonly_ci_datasets.tar.gz && tar -zxvf nwa12_tideonly_ci_datasets.tar.gz;
cd NWA12.tidesonly;
source /root/.bashenv
mpirun -np 4 ../../builds/build/docker-linux-intel/ocean_only/repro/MOM6;
cat ./ocean.stats;
diff -q ref/docker-linux-intel-repro/ocean.stats ./ocean.stats"
# - name: Build mom6solo
# working-directory: ./builds
# run: |
# echo "build mom6solo ..."
# ./linux-build.bash -m docker -p linux-intel -t repro -f mom6solo
# - name: Download 1d model dataset
# working-directory: ./exps
# run: |
# wget -q ftp.gfdl.noaa.gov:/pub/Yi-cheng.Teng/1d_ci_datasets.tar.gz && tar -zxvf 1d_ci_datasets.tar.gz && rm -rf 1d_ci_datasets.tar.gz
# - name: Run 1D toy case and check repro across restarts
# working-directory: ./exps/OM4.single_column.COBALT
# run: |
# ./driver.sh
# - name: Run mppnccombine to combine sub-region diag outputs
# working-directory: ./exps/OM4.single_column.COBALT
# run: |
# /opt/bin/mppnccombine -64 -h 16384 -m -k 100 20040102.ocean_daily_subset.nc 20040102.ocean_daily_subset.nc.00*
# - name: Check ref
# working-directory: ./exps/OM4.single_column.COBALT
# run: |
# echo "new 48hrs ocean.stats: "
# cat ./RESTART_48hrs/ocean.stats
# echo "baseline 48 hrs ocean.stats: "
# cat ./ref/ocean.stats
# diff -q ref/ocean.stats ./RESTART_48hrs/ocean.stats > /dev/null || { echo "Error: ocean.stats are different."; echo "Plz update exps/OM4.single_column.COBALT/ref/ocean.stats with the following: "; cat ./RESTART_48hrs/ocean.stats; exit 1; }