Fixes gridgen problem and localization for LETKF (#1372)

Adds the `gridgen.yaml ` back after being removed to` jcb-gdas`, to
allow LETKF to work with a fix within GDASApp. This is a temporary fix
until the LETKF task can be converted to using the jcb yamls.

Also adds `obs localization` to remaining obs config files - this will
have to likewise be carried over to whatever is being used with the obs
list.

parm/soca/gridgen/gridgen.yaml

@@ -0,0 +1,5 @@
+geometry:
+  geom_grid_file: soca_gridspec.nc
+  mom6_input_nml: mom_input.nml
+  fields metadata: fields_metadata.yaml
+  rossby file: rossrad.nc

parm/soca/obs/config/icec_amsu_mb_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_atms_n20_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_atms_n21_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_atms_npp_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_gmi_gpm_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_ssmis_f17_l2.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_viirs_n20_l2_north.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/icec_viirs_n20_l2_south.yaml

@@ -43,3 +43,10 @@ obs filters:
   where:
   - variable: {name: GeoVaLs/distance_from_coast}
     minvalue: 100e3
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_dbuoy.yaml

@@ -32,3 +32,10 @@ obs filters:
         coefs:
         - 1000.0
 
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_dbuoyb.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/waterTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_glider.yaml

@@ -32,3 +32,10 @@ obs filters:
         coefs:
         - 1000.0
 
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_marinemammal.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/waterTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_mbuoy.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/waterTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_mbuoyb.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/waterTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_tesac_salinity.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/salinity
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_profile_xbtctd.yaml

@@ -31,3 +31,10 @@ obs filters:
         - ObsError/waterTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_surface_altkob.yaml

@@ -27,3 +27,10 @@ obs filters:
         - ObsError/seaSurfaceTemperature
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3

parm/soca/obs/config/insitu_surface_trkob_salinity.yaml

@@ -27,3 +27,10 @@ obs filters:
         - ObsError/seaSurfaceSalinity
         coefs:
         - 1000.0
+obs localizations:
+- localization method: Rossby
+  base value: 100.0e3
+  rossby mult: 1.0
+  min grid mult: 2.0
+  min value: 200.0e3
+  max value: 900.0e3