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Optional bowtie build#6

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mahesh-panchal wants to merge 4 commits intoNBISweden:devNBISweden/nf-core-aMeta:devfrom mahesh-panchal:optional_bowtie_buildmahesh-panchal/nf-core-ameta:optional_bowtie_buildCopy head branch name to clipboard

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Commits on Jul 10, 2024

• Store index with input fasta and use it if there.

  mahesh-panchal

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  6c510cb

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• Add commented storeDir for samtools faidx

  mahesh-panchal

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  58a5bdd

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Commits on Sep 24, 2024

• Add conditional checks for SAMTOOLS_FAIDX and BOWTIE2_BUILD to skip existing indices

  ZoePochon

  committed
  668e7c9

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• Merge branch 'NBISweden:dev' into optional_bowtie_build

  ZoePochon

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  66aa976

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