Merge pull request #2 from mahesh-panchal/dev

Fix data path
NBISweden · Jun 4, 2024 · 875359b · 875359b
2 parents 9ac715b + 8664bb5
commit 875359b
Show file tree

Hide file tree

Showing 2 changed files with 3 additions and 4 deletions.
diff --git a/run_test.sh b/run_test.sh
@@ -8,5 +8,4 @@ nextflow run main.nf \
     -profile test,docker \
     -dump-channels \
     --outdir results \
-    --db_cache 'work/database_cache' \
-    --validate_params false
+    --db_cache 'work/database_cache'
diff --git a/test-data_tmp/resources/samples.csv b/test-data_tmp/resources/samples.csv
@@ -1,3 +1,3 @@
 sample,fastq_1,fastq_2
-foo,https://github.com/NBISweden/nf-core-aMeta/tree/dev/test-data_tmp/data/foo.fastq.gz,
-bar,https://github.com/NBISweden/nf-core-aMeta/tree/dev/test-data_tmp/data/bar.fastq.gz,
+foo,https://github.com/NBISweden/nf-core-aMeta/raw/dev/test-data_tmp/data/foo.fastq.gz,
+bar,https://github.com/NBISweden/nf-core-aMeta/raw/dev/test-data_tmp/data/bar.fastq.gz,