Merge pull request #48 from MolloiLab/AcceleratedKernels

check buildkite benchmarks

.buildkite/runbenchmarks.yml

@@ -137,4 +137,4 @@ steps:
           - "benchmarks/results/combinedbenchmarks.json"
         agents:
           queue: "benchmark"
-        timeout_in_minutes: 15
+        timeout_in_minutes: 15

.github/workflows/Benchmark.yml

@@ -8,27 +8,32 @@ permissions:
 on: 
   pull_request:
     branches:
-      - master
+      - main
     paths:
+      - "src/**/*"
+      - "ext/**/*"
+      - "Project.toml"
       - "benchmarks/**/*"
       - ".buildkite/**/*"
-      - "Project.toml"
-      - ".github/Benchmark.yml"
+      - ".github/workflows/Benchmark.yml"
   push:
     branches:
-      - master
+      - main
     paths:
+      - "src/**/*"
+      - "ext/**/*"
+      - "Project.toml"
       - "benchmarks/**/*"
       - ".buildkite/**/*"
-      - "Project.toml"
-      - ".github/Benchmark.yml"
+      - ".github/workflows/Benchmark.yml"
 
 jobs:
   benchmark:
     if: ${{ !contains(github.event.head_commit.message, '[skip benchmarks]') }}
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
+
       - name: Download Buildkite Artifacts
         id: download
         uses: EnricoMi/download-buildkite-artifact-action@v1
@@ -47,12 +52,11 @@ jobs:
         if: ${{ steps.locate.outputs.path != '' }}
         uses: benchmark-action/github-action-benchmark@v1
         with:
-          name: DistanceTransforms Benchmarks
+          name: Package Benchmarks
           tool: 'julia'
           output-file-path: ${{ steps.locate.outputs.path }}
           benchmark-data-dir-path: "benchmarks"
           github-token: ${{ secrets.GITHUB_TOKEN }}
-          # comment-on-alert: true
           comment-always: true
           summary-always: true
           alert-threshold: "150%"

benchmarks/aggregate.jl

@@ -50,4 +50,4 @@ for backend in GPU_BACKENDS
 end
 
 # Save the combined results
-BenchmarkTools.save(joinpath(@__DIR__, "results", "combinedbenchmarks.json"), RESULTS)
+BenchmarkTools.save(joinpath(@__DIR__, "results", "combinedbenchmarks.json"), RESULTS)

benchmarks/runbenchmarks.jl

@@ -24,4 +24,4 @@ filename = BENCHMARK_GROUP == "CPU" ?
     string(BENCHMARK_GROUP, "benchmarks.json")
 
 BenchmarkTools.save(joinpath(filepath, filename), median(results))
-@info "Saved results to $(joinpath(filepath, filename))"
+@info "Saved results to $(joinpath(filepath, filename))"

benchmarks/setup.jl

@@ -25,8 +25,11 @@ elseif BENCHMARK_GROUP == "oneAPI"
 end
 
 function setup_benchmarks(suite::BenchmarkGroup, backend::String, num_cpu_threads::Int64)
-    sizes_2D = [2^i for i in 3:12]
-    sizes_3D = [2^i for i in 0:8]
+    # sizes_2D = [2^i for i in 3:12]
+    # sizes_3D = [2^i for i in 0:8]
+
+    # sizes_2D = [2^i for i in 3:4]
+    # sizes_3D = [2^i for i in 0:1]
 
     if backend == "CPU"
         # 2D benchmarks
@@ -127,4 +130,4 @@ function setup_benchmarks(suite::BenchmarkGroup, backend::String, num_cpu_thread
     else
         @error "Unknown backend: $backend"
     end
-end
+end