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config_orig.yaml
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general_info:
multi_view: False
classes : ['background', 'Benign', 'Malignant']
random_seed : 2
image_source_dir_train : ''
image_source_dir_val : ''
image_source_dir_test : ''
best_weights_path : '/content/drive/MyDrive/BR-Runs/Run7/run/checkpoints'
activation : 'softmax'
image_height : 256
image_width : 256
image_channels: 3
train_batch_size : 32
val_batch_size : 32
test_batch_size : 32
patch_model_weight: ''
patch_training: True
three_phase_training: False
info_training:
run : '/content/drive/MyDrive/BR-Runs/Run7/run'
export: '/content/drive/MyDrive/BR-Runs/Run7/export'
epochs : 20
initial_learning_rate: 1e-4
loss : 'categorical_crossentropy'
export_metric : 'val_accuracy'
export_mode : 'max'
data_sequence:
train_csv_file : '../data/train.csv'
validation_csv_file : '../data/validation.csv'
test_csv_file : '../data/test.csv'
x_names : 'imgfile'
cc_names: ''
mlo_names: ''
image_height: 256
image_width: 256
image_channels: 3
augment : False
verbose : False
steps : None
shuffle_on_epoch_end : True
augmenter: False
synthesize: False
augmentation:
rotation_range: 10
rotation_proba: 0.3
flip_proba: 0.5
mlflow:
model_name: ResNet50
dataset: CBIS_Patches
training_mode: 'Patch-Classifier | Contrast Enhancement'
evaluation:
confusion_matrix : True
classification_report : True
performance_metrics : True
precision_recall_curves : True
auc_curves : True
wrong_prediction : "positive"
explainability : True
eval_saving_path : '/content/drive/MyDrive/BR-Runs/Run3/evaluation.csv'
saving_dir : '/content/drive/MyDrive/BR-Runs/Run3'