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@KolmogorovLab

Kolmogorov lab at NCI

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  1. hapdup hapdup Public

    Pipeline to convert a haploid assembly into diploid

    Python 96 11

  2. hapdiff hapdiff Public

    SV calling for diploid assemblies

    Python 24 3

  3. Severus Severus Public

    A tool for somatic structural variant calling using long reads

    Python 114 5

  4. Wakhan Wakhan Public

    Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data

    Python 32

Repositories

Showing 8 of 8 repositories
  • longread_somatic_nf Public
    KolmogorovLab/longread_somatic_nf’s past year of commit activity
    Nextflow 2 0 1 0 Updated Feb 4, 2025
  • Wakhan Public

    Haplotype-specific somatic copy number aberrations/profiling from long reads sequencing data

    KolmogorovLab/Wakhan’s past year of commit activity
    Python 32 MIT 0 1 0 Updated Feb 3, 2025
  • hapcorrect Public

    Haplotypes phase-switching errors correction in long reads

    KolmogorovLab/hapcorrect’s past year of commit activity
    Python 5 MIT 0 0 0 Updated Jan 24, 2025
  • hapdup Public

    Pipeline to convert a haploid assembly into diploid

    KolmogorovLab/hapdup’s past year of commit activity
    Python 96 11 5 0 Updated Jan 23, 2025
  • Severus Public

    A tool for somatic structural variant calling using long reads

    KolmogorovLab/Severus’s past year of commit activity
    Python 114 5 10 0 Updated Jan 20, 2025
  • strainy Public Forked from katerinakazantseva/strainy

    Graph-based assembly phasing

    KolmogorovLab/strainy’s past year of commit activity
    Python 1 5 0 0 Updated Oct 31, 2024
  • minda Public
    KolmogorovLab/minda’s past year of commit activity
    Python 14 3 1 0 Updated Jun 25, 2024
  • hapdiff Public

    SV calling for diploid assemblies

    KolmogorovLab/hapdiff’s past year of commit activity
    Python 24 MIT 3 2 0 Updated Mar 22, 2024

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