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add poetry
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hrshdhgd committed Feb 7, 2024
1 parent 8be020e commit 33451ec
Showing 1 changed file with 10 additions and 3 deletions.
13 changes: 10 additions & 3 deletions .github/workflows/uniprot_s3_dump.yml
Original file line number Diff line number Diff line change
Expand Up @@ -16,13 +16,20 @@ jobs:
uses: actions/setup-python@v5
with:
python-version: '3.x'


- name: Install Poetry
uses: snok/install-poetry@v1

- name: Install dependencies
run: poetry install --no-interaction

- name: Install dependencies
run: |
pip install requests boto3
poetry add requests
poetry add boto3
- name: Fetch data from Uniprot API
run: kg get-via-api -a uniprot
run: poetry run kg get-via-api -a uniprot

- name: Upload to S3
uses: aws-actions/configure-aws-credentials@v1
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