Skip to content

Kayv-cmb/SpikeinterfaceMS4

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

6 Commits
 
 
 
 
 
 

Repository files navigation

Spikeinterface

Installation of Spikeinterface

Create a new environment, Python need to be >=3.7

conda create --name environmnent

Activate you envinronment
If you want to use spyder

conda install spyder=5

for spikeinterface installation

pip install spikeinterface[full]==0.93

for phy

pip install phy==2.0b1

For Mountainsor4 in spikeinterface

pip install mountainsort4

Usage

Input the directory of the file you want to spikesort

Input the name of the file you want to spikesort it need to be to the .mda format (can be exported from trode)

It will use the inbuilt function of spikeinterface to run mountainsort and export to phy the result.

Warning to run the script you need to use crtl+A and F9

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published

Languages