Create dimenthylbenzimidazol.py

added_reactions/dimenthylbenzimidazol.py

@@ -0,0 +1,33 @@
+# 5,6-Dimenthylbenzimidazol reactions
+FMNH = model.metabolites.get_by_id("fmnh2_c")
+O2 = model.metabolites.get_by_id("o2_c")
+
+derythrosefourphosphate = model.metabolites.get_by_id("e4p_c")
+h = model.metabolites.get_by_id("h_c")
+Dmbd = model.metabolites.get_by_id("dmbzid_c")
+
+dialurate = Metabolite(
+    'dialurate_c',
+    formula = 'C4H4N2O4',
+    name = 'dialurate',
+    compartment = 'c')
+
+
+dimethy = Reaction("5,6-dimethylbenzimidazole")
+dimethy.name = "5,6-dimethylbenzimidazole"
+dimethy.add_metabolites({
+        FMNH: -1.0,
+        O2: -1.0,
+
+        h: 1.0,
+        derythrosefourphosphate: 1.0,
+        Dmbd: 1.0,
+        dialurate: 1.0
+        })
+
+
+
+model.add_reactions([dimethy])
+cobra.io.save_json_model(model, 'dimethy_iML1515.json')
+
+model.optimize().objective_value