Use [email protected] for FEniCS CI #27
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| name: FEniCS | |
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 1 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| auto-update-conda: true | |
| python-version: 3.8 | |
| mamba-version: "*" | |
| channels: conda-forge,defaults | |
| channel-priority: true | |
| - name: Conda info | |
| shell: bash -l {0} | |
| run: | | |
| conda info | |
| which python | |
| - name: Mamba install FEniCS | |
| shell: bash -l {0} | |
| run: | | |
| conda config --set always_yes yes | |
| conda config --add channels conda-forge | |
| mamba create -n fenicsproject -c conda-forge fenics | |
| conda activate fenicsproject | |
| which python | |
| python -c "from dolfin import *" | |
| - name: Install dependencies | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -m pip install --upgrade pip | |
| python -m pip install git+https://github.com/dolfin-adjoint/[email protected] | |
| python -m pip install git+https://github.com/IvanYashchuk/fecr@master | |
| python -m pip install pytest | |
| python -m pip install pytest-cov | |
| python -m pip install pytest-check | |
| python -m pip install coveralls | |
| python -m pip install fdm | |
| python -m pip install --upgrade jax jaxlib | |
| - name: Install JAX-FEniCS | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -m pip install . | |
| - name: Print path | |
| shell: bash -l {0} | |
| run: python -c "import sys; print('\n'.join(sys.path))" | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| conda activate fenicsproject | |
| python -c "import sys; print('\n'.join(sys.path))" | |
| python -m pytest --cov=jaxfenics_adjoint --cov-config=tests/.coveragerc tests/fenics -vvv | |
| - name: Send coveralls | |
| shell: bash -l {0} | |
| env: | |
| COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }} | |
| run: | | |
| conda activate fenicsproject | |
| coveralls |