add last updates team 6VV2 repro afni

Inria-Empenn · JLefortBesnard · Jun 22, 2023 · Jun 23, 2023 · Jun 23, 2023 · Jul 6, 2023
commit 54153acbf060c538f820c88df253e2249c6b8770
diff --git a/narps_open/pipelines/team_6VV2.firstlevel b/narps_open/pipelines/team_6VV2.firstlevel
@@ -57,6 +57,10 @@ afni_proc.py \
   -execute
 
 
+# extract beta values
+3dbucket -prefix GAIN ${expdir}/${subject}.results.block/stats.sub-001+tlrc.BRIK[3]
+3dbucket -prefix LOSS ${expdir}/${subject}.results.block/stats.sub-001+tlrc.BRIK[8]
 
-
-
+# convert BRIK to nii
+3dAFNItoNIFTI -prefix GAIN ${subject}_GAIN+tlrc
+3dAFNItoNIFTI -prefix LOSS ${subject}_LOSS+tlrc
diff --git a/notes.txt b/notes.txt
@@ -0,0 +1 @@
+datalad get ./data/original/ds001734/sub-001