[TEST] adding unit_test marker

pytest.ini

@@ -4,3 +4,4 @@ testpaths =
     tests
 markers =
     pipeline_test: marks tests that execute complete pipelines
+    unit_test: marks unit tests

tests/pipelines/test_pipelines.py

@@ -47,6 +47,7 @@ class TestPipelineDirectories:
     """ A class that contains all the unit tests for the PipelineDirectories class."""
 
     @staticmethod
+    @mark.unit_test
     def test_create():
         """ Test the creation of a PipelineDirectories object """
 
@@ -67,6 +68,7 @@ def test_create():
         assert pipeline_dir.output_dir == 'test_o'
 
     @staticmethod
+    @mark.unit_test
     def test_alternative_setters():
         """ Test the alternatives setters of PipelineDirectories """
 
@@ -92,6 +94,7 @@ class TestPipelines:
     """ A class that contains all the unit tests for the Pipeline class."""
 
     @staticmethod
+    @mark.unit_test
     def test_create():
         """ Test the creation of a Pipeline object """
 
@@ -125,6 +128,7 @@ class TestUtils:
     """ A class that contains all the unit tests for the utils in module pipelines."""
 
     @staticmethod
+    @mark.unit_test
     def test_utils():
         """ Test the utils methods of PipelineRunner """
         # 1 - Get number of not implemented pipelines

tests/pipelines/test_team_2T6S.py

@@ -22,6 +22,7 @@ class TestPipelinesTeam2T6S:
     """ A class that contains all the unit tests for the PipelineTeam2T6S class."""
 
     @staticmethod
+    @mark.unit_test
     def test_create():
         """ Test the creation of a PipelineTeam2T6S object """
 

tests/test_runner.py

@@ -95,6 +95,7 @@ class TestPipelineRunner:
     """ A class that contains all the unit tests for the PipelineRunner class."""
 
     @staticmethod
+    @mark.unit_test
     def test_create():
         """ Test the creation of a PipelineRunner object """
 
@@ -120,6 +121,7 @@ def test_create():
             runner.team_id = '08MQ'
 
     @staticmethod
+    @mark.unit_test
     def test_subjects():
         """ Test the PipelineRunner features of building subject lists """
         runner = PipelineRunner('2T6S')
@@ -154,6 +156,7 @@ def test_subjects():
         assert runner.subjects == ['022', '043', '045']
 
     @staticmethod
+    @mark.unit_test
     def test_start_nok():
         """ Test error cases for the start method of PipelineRunner """
         # 1 - test starting a pipeline with no subject settings
@@ -180,6 +183,7 @@ def test_start_nok():
             runner.start()
 
     @staticmethod
+    @mark.unit_test
     def test_start_ok():
         """ Test normal usecases of PipelineRunner """
         # 1 - test starting a pipeline where everything ok

tests/utils/test_correlation.py

@@ -41,6 +41,7 @@ class TestUtilsCorrelation:
     """ A class that contains all the unit tests for the correlation module."""
 
     @staticmethod
+    @mark.unit_test
     def test_mask_nan():
         """ Test the mask_using_nan function """
         # 1 - Create an image
@@ -65,6 +66,7 @@ def test_mask_nan():
         assert isnan(out_image_data[1, 1, 1])
 
     @staticmethod
+    @mark.unit_test
     def test_mask_zeros():
         """ Test the mask_using_zeros function """
         # 1 - Create an image
@@ -89,6 +91,7 @@ def test_mask_zeros():
         assert isclose(out_image_data[1, 1, 1], 0.0)
 
     @staticmethod
+    @mark.unit_test
     def test_correlation(remove_temporary_files):
         """ Test the get_correlation_coefficient function, normal usecases """
         # 1 - Create an image & save it to the working directory
@@ -128,6 +131,7 @@ def test_correlation(remove_temporary_files):
             0.08787495503274935)
 
     @staticmethod
+    @mark.unit_test
     def test_correlation_wrong(remove_temporary_files):
         """ Test the get_correlation_coefficient function, error cases """
         # 1 - Create an image & save it to the working directory

tests/utils/test_description.py

@@ -19,6 +19,7 @@ class TestUtilsDescription:
     """ A class that contains all the unit tests for the description module."""
 
     @staticmethod
+    @mark.unit_test
     def test_creation():
         """ Test the creation of a TeamDescription object """
 
@@ -34,6 +35,7 @@ def test_creation():
         assert TeamDescription('2T6S') is not None
 
     @staticmethod
+    @mark.unit_test
     def test_arguments_properties():
         """ Test the arguments and properties of a TeamDescription object """
 

tests/utils/test_utils.py

@@ -17,6 +17,7 @@ class TestUtils:
     """ A class that contains all the unit tests for the utils module."""
 
     @staticmethod
+    @mark.unit_test
     def test_get_all_participants():
         """ Test the get_all_participants function """
         participants_list = get_all_participants()
@@ -26,6 +27,7 @@ def test_get_all_participants():
         assert '123' in participants_list
 
     @staticmethod
+    @mark.unit_test
     def test_get_participants():
         """ Test the get_participants function """