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Removing unused dependencies
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mcencini committed Jan 10, 2024
1 parent 17df88d commit df68a40
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Showing 3 changed files with 34 additions and 31 deletions.
6 changes: 6 additions & 0 deletions docs/source/api/generated/deepmr.io.read_rawdata.rst
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@@ -0,0 +1,6 @@
deepmr.io.read\_rawdata
=======================

.. currentmodule:: deepmr.io

.. autofunction:: read_rawdata
22 changes: 12 additions & 10 deletions docs/source/conf.py
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Expand Up @@ -23,16 +23,18 @@
"sphinx.ext.napoleon",
"sphinx.ext.viewcode",
]
autodoc_mock_imports = ['torch',
'dacite',
'numpy',
'scipy',
'matplotlib',
'h5py',
'nibabel',
'pydicom',
'mat73',
'ismrmrd']

autodoc_mock_imports = ["h5py",
"ismrmrd",
"mat73",
"matplotlib",
"nibabel",
"numpy",
"numba",
"pydicom",
"scipy",
"torch",
"tqdm"]

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
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37 changes: 16 additions & 21 deletions setup.cfg
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Expand Up @@ -49,22 +49,17 @@ python_requires = >=3.9
# For more information, check out https://semver.org/.
install_requires =
importlib-metadata; python_version<"3.9"
dacite
h5py
ismrmrd
mat73
matplotlib
nibabel
numpy
numba
phantominator
pydicom
pynetdicom
scipy
torch
tqdm
nufftorch @ git+https://github.com/FiRMLAB-Pisa/nufft-torch.git

h5py
ismrmrd
mat73
matplotlib
nibabel
numpy
numba
pydicom
scipy
torch
tqdm

[options.packages.find]
where = src
Expand All @@ -78,16 +73,16 @@ exclude =

# Add here test requirements (semicolon/line-separated)
dev =
autoflake
autoflake
black
pytest
pytest-cov
sphinx==6.2.1
tox
sphinx==6.2.1
tox

ide =
spyder
notebook
spyder
notebook

[options.entry_points]
# Add here console scripts like:
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