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Modified the way query index bed files are generated increasing the
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speed and reducing the memory footprint.  Was running into issues when
indexing big chIPSeq and diff gene expression datasets.  From overnight
to < 10 min!
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DavidAustinNix authored and DavidAustinNix committed Feb 7, 2017
1 parent 0cc68b2 commit 90706a3
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2 changes: 1 addition & 1 deletion .classpath
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<classpathentry kind="lib" path="LibraryJars/bytecode.jar"/>
<classpathentry kind="lib" path="LibraryJars/bzip2.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-beanutils.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-codec-1.3.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-collections-3.0.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-collections-3.1.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-collections-testframework-3.0.jar"/>
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<classpathentry kind="lib" path="LibraryJars/minimal-json-0.9.4.jar"/>
<classpathentry kind="lib" path="LibraryJars/mongo-java-driver-2.14.2.jar"/>
<classpathentry kind="lib" path="LibraryJars/json-20140107.jar"/>
<classpathentry kind="lib" path="LibraryJars/commons-codec-1.10.jar"/>
<classpathentry kind="output" path="Classes"/>
</classpath>
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