Merge branch 'main' of https://github.com/GriffithsLab/BastiaensAlpha…

…Models_NeuroLibre

README.md

@@ -3,8 +3,8 @@
 Origins of content:
 
 - Github repo with modeling analysis code [here](https://github.com/GriffithsLab/Bastiaens2024_AlphaModels)
-- Manuscript BiorXiv preprint [here](https://github.com/GriffithsLab/Bastiaens2024_AlphaModels)
-- Overleaf latex source of preprint [here](https://github.com/GriffithsLab/BastiaensAlphaModels_NeuroLibre)
+- Manuscript BiorXiv preprint [here](https://doi.org/10.1101/2024.03.01.583035)
+- Overleaf latex source of preprint [here](https://github.com/JohnGriffiths/BastiaensAlphaModels_OverLeafSource)
 
 
 Contributors to NeuroLibre porting work:
@@ -14,8 +14,15 @@ Contributors to NeuroLibre porting work:
 - Jan Fousek
 - Agah Karakuzu
 - Yasmin Sheikh
-- ...
+- Barzany Ridha
 - Justin Chang
 - ...
 - ...
 
+
+Porting Process and Workflow:
+
+- We used [l2m](https://github.com/agahkarakuzu/l2m.git), a LaTeX to MySTmd converter to convert the text of the original article, which was in a LaTeX source, to a markdown format.
+- The converted content was then mapped into the .md file containing the MyST article template.
+- Figures and data from the original PDF and Jupyter workbooks were then mapped to the MyST article to reflect the original intended structure of the article with added MyST functionality.
+- The compiled figures and .ipynb notebooks will appear as "secondary supplementary material section"