Merge branch 'dev'

FridleyLab · Sep 30, 2024 · a98590c · a98590c
2 parents 5f1739e + e9a4965
commit a98590c
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Showing 2 changed files with 4 additions and 8 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: scSpatialSIM
 Title: A Point Pattern Simulator for Spatial Cellular Data
-Version: 0.1.3.3
+Version: 0.1.3.4
 Authors@R: 
     c(
       person(given = "Alex",
@@ -30,7 +30,7 @@ Authors@R:
              comment = c(ORCID = "")),
       person(given = "Brooke", 
              family = "Fridley", 
-             email = "brooke.fridley.moffitt.org", 
+             email = "[email protected]", 
              role = c("aut", "cph"), 
              comment = c(ORCID = "")),
       person(given = "Fridley",

diff --git a/R/creating_spatial_processes.R b/R/creating_spatial_processes.R
@@ -62,12 +62,8 @@ GenerateSpatialPattern = function(sim_object, lambda = 25, ..., overwrite = FALS
 
     #make the list of spatial dataframes like spatstat
     spatial_dfs = lapply(seq(sims), function(hld){
-      sp_df = list(window = window,
-           n = nrow(new_raw_df),
-           x = new_raw_df$x + min(window$xrange),
-           y = new_raw_df$y + min(window$yrange),
-           markformat = 'none')
-      class(sp_df) = 'ppp'
+      sp_df = data.frame(x = new_raw_df$x + min(window$xrange),
+                         y = new_raw_df$y + min(window$yrange))
       return(sp_df)
     })
   } else {