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get rid of old uninformative pxbp test
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josephwb committed Oct 21, 2024
1 parent d723485 commit 9618d80
Showing 1 changed file with 0 additions and 5 deletions.
5 changes: 0 additions & 5 deletions src/run_tests.py
Original file line number Diff line number Diff line change
Expand Up @@ -113,11 +113,6 @@ def test_program(name):
return res
elif name == "pxbp":
res = True
print("old test ", end = '')
cm = "./pxbp -t TEST/test.tre"
t = '1 trees \n3 unique clades found\nCLADE: TaxonA TaxonB FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nCLADE: TaxonA TaxonB TaxonC FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nCLADE: TaxonD TaxonE FREQ: 1. ICA: 1. COUNT: 1 TREEFREQ: 1.\nTSCA: 3\n'
if not check_individual_results(cm, t):
res = False
print("node-based ", end = '')
cm = "./pxbp -t nat.tre"
t = '2 trees \n7 unique clades found\nCLADE: F G FREQ: 1. ICA: 1. COUNT: 2 TREEFREQ: 1.\nCLADE: E D FREQ: 1. ICA: 1. COUNT: 2 TREEFREQ: 1.\nCLADE: F G E D FREQ: 0.5 ICA: 0 COUNT: 1 TREEFREQ: 0.5\nCLADE: C B FREQ: 0.5 ICA: 0 COUNT: 1 TREEFREQ: 0.5\nCLADE: C B A FREQ: 1. ICA: 1. COUNT: 2 TREEFREQ: 1.\nCLADE: C A FREQ: 0.5 ICA: 0 COUNT: 1 TREEFREQ: 0.5\nCLADE: E D C B A FREQ: 0.5 ICA: 0 COUNT: 1 TREEFREQ: 0.5\nTSCA: 3\n'
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