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@andand andand released this 20 Mar 21:35
· 67 commits to master since this release
v0.8.0
8a8b852
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Learn about vigilant mode.
  • Calculates per codon and sample amino acid frequencies.
  • Calculates normalized genome-wide pi based on estimated coverage breadth.
  • Option to calculate permuted gene-wise FST (new argument --fst_perm).
  • Option to restrict analysis to samples specified in file (new argument --sample_file).
  • Option to only calculate genome-wide pi (new argument ---pi-only).
  • Input_POGENOM pipeline for automatic VCF file generation.
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