update output definitions

ENCODE-DCC · Jul 1, 2020 · 90b9a1c · 90b9a1c
1 parent a8eb78d
commit 90b9a1c
Showing 1 changed file with 16 additions and 1 deletion.
diff --git a/output_definition.json b/output_definition.json
@@ -60,6 +60,21 @@
         }
     },
 
+    "long_read_rna_pipeline.talon_label_reads": {
+        "labeled_bam": {
+            "path": "talon_label_reads/rep${i+1}/${basename}",
+            "table": "TALON_Label_Reads/Replicate ${i+1}/Labeled BAM"
+        },
+        "labeled_sam": {
+            "path": "talon_label_reads/rep${i+1}/${basename}",
+            "table": "TALON_Label_Reads/Replicate ${i+1}/Labeled SAM"
+        },
+        "read_labels_tsv": {
+            "path": "talon_label_reads/rep${i+1}/${basename}",
+            "table": "TALON_Label_Reads/Replicate ${i+1}/Read label TSV"
+        }
+    },
+
     "long_read_rna_pipeline.create_abundance_from_talon_db": {
         "talon_abundance": {
             "path": "create_abundance_from_talon_db/rep${i+1}/${basename}",
@@ -84,4 +99,4 @@
             "table": "Spearman/replicates spearman correlation"
         }
     }
-}
+}