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Gareths npe paper
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richardbeare committed Nov 16, 2017
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<li> <a href="http://DevelopmentalImagingMCRI.github.io/mantis">MANTiS: Morphologically adaptive neonate tissue segmentation.</a> An SPM toolbox for tissue classification in T2 weighted MRI scans for neonates.
<li> <a href="http://DevelopmentalImagingMCRI.github.io/dwimotioncorrect">DWIMotionCorrect.</a> A modified eddy/motion correction tool which reduces registration bias at b=3000.
<li> <a href="http://DevelopmentalImagingMCRI.github.io/freesurfer_statsurf_display">freesurfer_statsurf_display.</a> A set of tools for MATLAB that plots Freesurfer surfaces with each region of a selected cortical parcellation coloured according to p-value/effect size/arbitrary values/freesurfer colours/r squared.
<li> <a href="http://github.com/richardbeare/mbwss"> Marker-based watershed scalper.</a> A fast and robust data driven brain extraction tool for T1 weighted images based on the morphological watershed transform. Versions for human and macaque scans are included.
<li> <a href="http://github.com/richardbeare/mbwss"> Marker-based
watershed scalper.</a> A fast and robust data driven brain
extraction tool for T1 weighted images based on the morphological
watershed transform. Versions for human and macaque scans are
included.
<li> <a
href="http://github.com/DevelopmentalImagingMCRI/supervisedNPE">
Supervised neighbourhood preserving embedding</a> for detecting
patterns of variation in MRI scans. Code supporting <a
href="https://www.biorxiv.org/content/early/2017/04/11/126441">Ball
et al</a>.
</ul>
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