Add FIXMEs (#6778)

src/azul/indexer/__init__.py

@@ -367,6 +367,8 @@ class SourceSpec(Generic[SOURCE_SPEC], metaclass=ABCMeta):
     have simple unstructured names may want to use :class:`SimpleSourceSpec`.
     """
 
+    # FIXME: Improve equality and interning semantics for source ref and spec
+    #        https://github.com/DataBiosphere/azul/issues/6778
     prefix: Prefix | None
 
     @classmethod
@@ -475,6 +477,9 @@ class SourceRef(SupportsLessAndGreaterThan, Generic[SOURCE_SPEC, SOURCE_REF]):
     spec. There may be an instance of a subclass of this class that has the same
     ID and spec as an instance of this class or another subclass of this class.
 
+    FIXME: Improve equality and interning semantics for source ref and spec
+           https://github.com/DataBiosphere/azul/issues/6778
+
     Note to plugin implementers: Since the source ID can't be assumed to be
     globally unique, plugins should subclass this class, even if the subclass
     body is empty.
@@ -500,6 +505,9 @@ def __new__(cls: type[SOURCE_REF], *, id: str, spec: SOURCE_SPEC) -> SOURCE_REF:
         Interns instances by their ID and spec. Two different sources may still
         use the same ID or spec.
 
+        FIXME: Improve equality and interning semantics for source ref and spec
+               https://github.com/DataBiosphere/azul/issues/6778
+
         >>> class S(SourceRef): pass
         >>> a, b  = SimpleSourceSpec.parse('a:/0'), SimpleSourceSpec.parse('b:/0')
 

test/integration_test.py

@@ -433,6 +433,8 @@ def _wait_for_indexer():
                 with self._service_account_credentials:
                     fqids = self._get_indexed_bundles(catalog)
                 indexed_sources = {fqid.source for fqid in fqids}
+                # FIXME: Improve equality and interning semantics for source ref and spec
+                #        https://github.com/DataBiosphere/azul/issues/6778
                 ma_source_ids = {s.id for s in self.managed_access_sources_by_catalog[catalog]}
                 public_source = one(s for s in indexed_sources if s.id not in ma_source_ids)
                 ma_source = only(s for s in indexed_sources if s.id in ma_source_ids)