Upgrade pyranges and pandas #209
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| name: pytest | |
| on: [push, pull_request] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| - name: Install dependencies | |
| run: | | |
| conda install -n base python=3.10 conda-forge::biopython numpy==1.26 bioconda::pyranges==0.0.129 packaging bioconda::scanpy pytest -y | |
| - name: pytest | |
| run: | | |
| pip install . | |
| pytest |