MVP and Transformation Engine

MVP and Transformation Engine

This release includes the MVP updates and the transformation engine.

What's Changed

• fix(deps): update dependency org.apache.groovy:groovy to v4.0.20 by @renovate in #949
• chore(deps): update azure/login action to v2 by @renovate in #928
• chore(deps): update azure/cli action to v2 by @renovate in #935
• Validation test examples by @basiliskus in #924
• fix(deps): update dependency org.postgresql:postgresql to v42.7.3 by @renovate in #951
• fix(deps): update dependency com.azure:azure-identity to v1.11.4 by @renovate in #952
• fix(deps): update dependency com.fasterxml.jackson.core:jackson-databind to v2.17.0 by @renovate in #953
• fix(deps): update dependency com.fasterxml.jackson.dataformat:jackson-dataformat-yaml to v2.17.0 by @renovate in #959
• fix(deps): update minor dependencies to v2.17.0 by @renovate in #958
• chore(deps): update terraform azurerm to v3.96.0 by @renovate in #960
• fix(deps): update patch dependencies by @renovate in #968
• chore(deps): update terraform azurerm to v3.97.0 by @renovate in #969
• Added metadata by @jherrflexion in #967
• chore(deps): update minor dependencies by @renovate in #971
• Validation Rules Engine by @basiliskus in #943
• Results Metadata Update by @saquino0827 in #972
• Update instructions to set up RS locally by @basiliskus in #979
• Destroy PR Environment Only on PR Close by @halprin in #977
• chore(deps): update terraform azurerm to v3.97.1 by @renovate in #970
• 621: Order/Result Linking Fields Added to Metadata Table by @halprin in #983
• Add RS scripts to simplify set up by @basiliskus in #981
• Fix old reference and typos in readme by @basiliskus in #987
• Add implementation for resolve() missing from the HapiFhir library by @luis-pabon-tf in #984
• Extract IDs Metadata Extract Refactoring by @jorg3lopez in #999
• 621: Make the DbDoa More Generic by @halprin in #986
• Update dependency jacoco to v0.8.12 by @renovate in #1000
• 341: Fix Validation Rule Engine concurrency issues by @basiliskus in #997
• fix(deps): update dependency nl.jqno.equalsverifier:equalsverifier to v3.16.1 by @renovate in #1002
• Extract Fields From FHIR Bundle by @jorg3lopez in #982
• Made some light refactoring on FhirResource by @luis-pabon-tf in #1005
• chore(deps): update terraform azurerm to v3.98.0 by @renovate in #1004
• fix(deps): update dependency ch.qos.logback:logback-classic to v1.5.4 by @renovate in #1006
• fix(deps): update dependency org.apache.groovy:groovy to v4.0.21 by @renovate in #1007
• Add ingestion time and call Delivery by @jcrichlake in #1011
• Zap scanner image fix by @basiliskus in #1013
• Add @Override to SendOrderUseCase by @halprin in #1014
• 621: Save Metadata from FHIR Sender/Receiver/Number by @halprin in #985
• Add test validation scenarios for Results by @basiliskus in #1012
• fix(deps): update dependency com.azure:azure-identity to v1.12.0 by @renovate in #1015
• chore(deps): update plugin org.sonarqube to v5 by @renovate in #973
• fix(deps): update dependency org.slf4j:slf4j-api to v2.0.13 by @renovate in #1016
• Story/989/ingestion time fix by @somesylvie in #1021
• fix(deps): update dependency ch.qos.logback:logback-classic to v1.5.5 by @renovate in #1018
• chore(deps): update terraform azurerm to v3.99.0 by @renovate in #1022
• 621: Implement check for linked orders/results by @basiliskus in #988
• 621: Generic Read Metadata by @halprin in #1019
• chore(deps): update amazoncorretto docker tag to v17.0.11-alpine by @renovate in #1026
• fix(deps): update dependency ch.qos.logback:logback-classic to v1.5.6 by @renovate in #1028
• chore(deps): update terraform azurerm to v3.100.0 by @renovate in #1030
• HikariCP maxLifetime settings update by @saquino0827 in #1029
• Add hurl scripts by @basiliskus in #1009
• Removed flag for doUpdatePartnerMetadata by @jherrflexion in #1034
• Add linked message ids to OperationOutcome by @basiliskus in #1023
• fix(deps): update patch dependencies by @renovate in #1038
• HikariCP config fix by @saquino0827 in #1035
• 690: Save reportId for Outbound Messages by @halprin in #1039
• HikariCP Lifetime Handling fix by @luis-pabon-tf in #1042
• Added Liquibase migration action by @jherrflexion in #1036
• Refactor readMetadataForMessageLinking so it doesn't return itself by @basiliskus in #1043
• Revisit 990 by @jorg3lopez in #1040
• chore(deps): update terraform azurerm to v3.101.0 by @renovate in #1047
• Adding logging to save others in the future by @jcrichlake in #1055
• Adding setup to docs by @jcrichlake in #1057
• fix(deps): update dependency com.azure:azure-identity to v1.12.1 by @renovate in #1060
• Rules engine refactoring by @basiliskus in #1037
• fix(deps): update dependency io.javalin:javalin to v6.1.4 by @renovate in #1064
• fix(deps): update dependency com.fasterxml.jackson.dataformat:jackson-dataformat-yaml to v2.17.1 by @renovate in #1065
• fix(deps): update patch dependencies to v2.17.1 by @renovate in #1066
• chore(deps): update terraform azurerm to v3.102.0 by @renovate in #1067
• Stream1/1044/e2e tests by @jcrichlake in #1061
• Readme updates by @somesylvie in #1063
• Fix Load Tests Due to Multiple ResultSets by @halprin in #1073
• Delete Demographics by @halprin in #1072
• Transformation rule engine implementation by @basiliskus in #1046
• Refactor transformation helpers by @basiliskus in #1085
• Update Terraform azurerm to v3.103.0 by @renovate in #1086
• Modified FHIR Path Mapping enum to include HL7v2 values by @tjohnson7021 in #1087
• Update patch dependencies by @renovate in #1088
• Adding logging for getting a token from Azure by @jcrichlake in #1094
• Use a (local) test DB for load tests so it doesn't wipe out the regular local DB by @somesylvie in #1074
• Retrieve Linked Metadata for Outbound Report ID by @halprin in #1099
• Update minor dependencies by @renovate in #1105
• Add new transformation rules by @basiliskus in #1069
• Update Terraform azurerm to v3.104.2 by @renovate in #1106
• Story-1001: Azure Log Alert Set up by @saquino0827 in #1102
• Remove throwing exception in transformations by @basiliskus in #1104
• Fix NPE for Logging when getting the Azure Database Credentials by @halprin in #1107
• Add TI hurl scripts by @basiliskus in #1053
• Fixes for baseline transformations by @basiliskus in #1112
• UCSD Baseline Results Transformation: Update Receiving Facility (MSH-6) by @basiliskus in #1096
• Update alpine Docker tag to v3.20.0 by @renovate in #1113
• Update minor dependencies by @renovate in #1114
• UCSD Baseline Results Transformation: OBR Overrides by @luis-pabon-tf in #1101
• Update dependency io.javalin:javalin to v6.1.6 by @renovate in #1116
• Fix Database Deploy by @halprin in #1117
• Fixing PR destroy by @jcrichlake in #1118
• 1001: Rotate Database Password by @halprin in #1119
• Update Terraform azurerm to v3.106.0 by @renovate in #1125
• Update Terraform azurerm to v3.106.1 by @renovate in #1126
• Update patch dependencies to v7.2.1 by @renovate in #1127
• Update dependency gradle to v8.8 by @renovate in #1128
• ORU OBR Flattening by @basiliskus in #1115
• Fix id handling in load tests by @basiliskus in #1129
• Fix message encoding when sending HTTP request back to RS by @basiliskus in #1134
• Update dependency com.azure:azure-storage-blob to v12.26.1 by @renovate in #1135
• Update Terraform azurerm to v3.107.0 by @renovate in #1137
• Update dependency com.azure:azure-identity to v1.12.2 by @renovate in #1140
• Add condition to handle case when running RS locally by @basiliskus in #1139
• Add Containerization To Load Test by @jorg3lopez in #1130
• Update docker/build-push-action action to v6 by @renovate in #1146
• Update Terraform azurerm to v3.108.0 by @renovate in #1145
• Update UCSD transformation filters with expected values by @basiliskus in #1144
• Update Outdated Dependencies in our Docker Image by @halprin in #1148
• Update alpine Docker tag to v3.20.1 by @renovate in #1152
• Minimum TLS Version for Storage Accounts by @halprin in #1150
• Update patch dependencies to v0.12.6 by @renovate in #1154
• Update minor dependencies by @renovate in #1155
• Update dependency io.github.cdimascio:dotenv-java to v3.0.1 by @renovate in #1158
• Add most recent CDPH test HL7 ORU files by @basiliskus in #1160

New Contributors

• @luis-pabon-tf made their first contribution in #984
• @somesylvie made their first contribution in #1021

Full Changelog: v1.1.0...v1.2.0