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fixing timestamp parsing #118

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fixing timestamp parsing #118

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19 changes: 12 additions & 7 deletions caveclient/chunkedgraph.py
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Original file line number Diff line number Diff line change
Expand Up @@ -82,7 +82,11 @@ def root_id_int_list_check(
root_id,
make_unique=False,
):
if isinstance(root_id, int) or isinstance(root_id, np.uint64) or isinstance(root_id, np.int64):
if (
isinstance(root_id, int)
or isinstance(root_id, np.uint64)
or isinstance(root_id, np.int64)
):
root_id = [root_id]
elif isinstance(root_id, str):
try:
Expand Down Expand Up @@ -332,10 +336,8 @@ def get_user_operations(
response = self.session.get(url, params=params)

d = handle_response(response)
df = pd.DataFrame(d)
df["timestamp"] = df["timestamp"].map(
lambda x: datetime.datetime.fromtimestamp(x / 1000, pytz.UTC)
)
df = pd.DataFrame(json.loads(d))
df['timestamp'] = df['timestamp'].apply(lambda x: datetime.datetime.fromtimestamp(x, tz=datetime.timezone.utc))
return df

def get_tabular_change_log(self, root_ids, filtered=True):
Expand Down Expand Up @@ -884,9 +886,12 @@ def suggest_latest_roots(

delta_layers = 4
if stop_layer is None:
stop_layer = self.segmentation_info.get("graph", {}).get("n_layers", 6) - delta_layers
stop_layer = (
self.segmentation_info.get("graph", {}).get("n_layers", 6)
- delta_layers
)
stop_layer = max(1, stop_layer)

chunks_orig = self.get_leaves(root_id, stop_layer=stop_layer)
chunk_list = np.array(
[
Expand Down