Code

Update for Analysis Vignette#17

Code

Merged

Xyarz merged 50 commits intomainBoehringer-Ingelheim/BayesianMCPMod:mainfrom update-analysis-vignetteBoehringer-Ingelheim/BayesianMCPMod:update-analysis-vignetteCopy head branch name to clipboardJun 28, 2024

+939-457

Commits

Commits on Feb 25, 2024

• minor formatting; adding newline breaks

  stevegbrooks

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  87efc2b

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• added references.bib; adjusted .qmd for refs links

  stevegbrooks

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  cae733a

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• made prior spec more generic

  stevegbrooks

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• working on dose models; improved error message for getOptParams()

  stevegbrooks

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• add caching; use explicit namespaces

  stevegbrooks

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  3bd13bf

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• edit gitignore

  stevegbrooks

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• edit gitignore

  stevegbrooks

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• rm quarto render stuff

  stevegbrooks

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• edit gitignore

  stevegbrooks

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Commits on Mar 2, 2024

• added missing dose shapes

  stevegbrooks

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• display treatment effects for dose groups

  stevegbrooks

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  4a6fbab

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• formatting for quarto

  stevegbrooks

  committed
  d94f8d5

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• use display_params_table custom function for bmcp results

  stevegbrooks

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• add display for fit and bootstrap

  stevegbrooks

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Commits on Mar 22, 2024

• Addition of betaMod function

  sebastianbossert

  committed
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• Name betaMod updated

  sebastianbossert

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Commits on Mar 25, 2024

• bracket bug

  stevegbrooks

  committed
  f67a5fa

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• updated dose response model parameterization section

  stevegbrooks

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  8c5dc36

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Commits on Mar 27, 2024

• minor edits

  stevegbrooks

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• ...

  stevegbrooks

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Commits on Mar 29, 2024

• edits to readability, flow of analysis_vignette; allowed getModelFits to access scal param for betaMod shape; improved display of BMCP_result

  stevegbrooks

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Commits on Apr 28, 2024

• added vignette dependencies to suggests

  stevegbrooks

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  d1ea476

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• corrected spelling error for modelling

  stevegbrooks

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• ...

  stevegbrooks

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  b88194a

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• updated print method for BayesianMCP object

  stevegbrooks

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• change name to modeling

  stevegbrooks

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  eb3c846

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• updated wordlist

  stevegbrooks

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• updated docs

  stevegbrooks

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  ce2a0a8

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• spelling

  stevegbrooks

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  e750aa9

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• updated vignette to be more concise

  stevegbrooks

  committed
  18a6386

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Commits on Apr 29, 2024

• fixed bug in getBootstrapQuantiles that didnt return level for betaMod factor

  stevegbrooks

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• ...

  stevegbrooks

  committed
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Commits on Jun 12, 2024

• correction of bug in beta function and inclusion of beta and quadratic in plot function

  

  Bossert

  committed
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Commits on Jun 24, 2024

• Minor changes in the formulation and deletion of one code chunk

  

  Bossert

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Commits on Jun 27, 2024

• test

  

  Kleibrink,Gina_Marie (MED BDS) BIP-DE-B

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Commits on Jun 28, 2024

• readd vignettes

  

  Andersen

  committed
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• Merge branch 'main' into update-analysis-vignette

  Xyarz

  authored
  6aa2904

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• minor change on DESCRIPTION file

  

  Andersen

  committed
  537d579

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• refactor

  

  Andersen

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• adjust and add quarto in gh actions

  

  Andersen

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  acf3360

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• adjusted gh actions

  

  Andersen

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  408e932

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• fixing minor things

  

  Andersen

  committed
  73228fa

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• adjustment based on function changes

  

  Andersen

  committed
  a078450

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• bug fix

  

  Andersen

  committed
  830ef94

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• removed explicit calls

  

  Andersen

  committed
  46a6e20

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• minor

  

  Andersen

  committed
  2c8390e

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• rebuild

  

  Andersen

  committed
  0420d18

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• minor

  

  Andersen

  committed
  58b535b

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• further adjustments

  

  Andersen

  committed
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• explicit install on workflow added

  

  Andersen

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