Merge pull request #12 from BU-Spark/scc-setup-jepstein6.7.2024

set up shared conda env on scc
BU-Spark · Jun 10, 2024 · 7659c11 · 7659c11
2 parents b4bf6df + e0564e3
commit 7659c11
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diff --git a/scc-config/.condarc b/scc-config/.condarc
@@ -0,0 +1,7 @@
+envs_dirs:
+    - /rprojectnb/sparkpit/pit-seasonwatch/
+    - ~/.conda/envs
+pkgs_dirs:
+    - /rprojectnb/sparkpit/pit-seasonwatch/seasonwatch-ml-pkgs
+    - ~/.conda/pkgs
+env_prompt: ({name})
diff --git a/scc-config/README.md b/scc-config/README.md
@@ -0,0 +1,12 @@
+# SCC Conda Environment setup
+```
+# project directory
+cd /restricted/projectnb/sparkpit/pit-seasonwatch/pitne-season-watch
+
+# initialize .condarc
+bash scc-config/setup-condarc.sh
+
+# activate seasonwatch-ml conda environment
+module load miniconda/23.11.0
+conda activate /restricted/projectnb/sparkpit/pit-seasonwatch/seasonwatch-ml
+```
diff --git a/scc-config/setup-condarc.sh b/scc-config/setup-condarc.sh
@@ -0,0 +1,3 @@
+#!/bin/bash
+cd "$(dirname "$0")"
+cp ./.condarc ~/.condarc