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B-UMMI · Jun 27, 2024 · 472f7ac · 472f7ac
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,5 +1,9 @@
 # Changelog
 
+## 3.3.7 - 2024-06-27
+
+- Fixed issue in the PrepExternalSchema module related to the adaptation of small loci (BLASTp would not report the self-alignment). 
+
 ## 3.3.6 - 2024-06-12
 
 - Added support for translation tables different than 11 to UniprotFinder and AlleleCallEvaluator.

diff --git a/CHEWBBACA/__init__.py b/CHEWBBACA/__init__.py
@@ -1,2 +1,2 @@
 
-__version__ = "3.3.6"
+__version__ = "3.3.7"
diff --git a/CHEWBBACA/docs/conf.py b/CHEWBBACA/docs/conf.py
@@ -18,11 +18,11 @@
 # -- Project information -----------------------------------------------------
 
 project = 'chewBBACA'
-copyright = '2022, UMMI'
+copyright = '2024, UMMI'
 author = 'Rafael Mamede'
 
 # The full version, including alpha/beta/rc tags
-release = '3.3.6'
+release = '3.3.7'
 
 # -- General configuration ---------------------------------------------------
 

diff --git a/CHEWBBACA/docs/user/getting_started/installation.rst b/CHEWBBACA/docs/user/getting_started/installation.rst
@@ -8,15 +8,15 @@ Install the latest released version using `conda <https://anaconda.org/bioconda/
 
 ::
 
-	conda create -c bioconda -c conda-forge -n chewie "chewbbaca=3.3.6"
+	conda create -c bioconda -c conda-forge -n chewie "chewbbaca=3.3.7"
 
 If you're having issues installing chewBBACA through conda, please verify that you are using
 conda>=22.11, and enable the libmamba solver, which might speed up the installation process.
 You can also install `mamba <https://mamba.readthedocs.io/en/latest/index.html>`_ and run the following command:
 
 ::
 
-	mamba create -c bioconda -c conda-forge -n chewie "chewbbaca=3.3.6"
+	mamba create -c bioconda -c conda-forge -n chewie "chewbbaca=3.3.7"
 
 .. important::
 	We strongly recommend that users install and use BLAST 2.9.0+ with chewBBACA<=3.3.2. Please open an

diff --git a/CITATION.cff b/CITATION.cff
@@ -13,7 +13,7 @@ authors:
     given-names: João
   - family-names: Ramirez
     given-names: Mário
-version: 3.3.6
+version: 3.3.7
 date-released: "2023-06-29"
 keywords:
   - bioinformatics

diff --git a/README.md b/README.md
@@ -17,21 +17,9 @@ BLAST Score Ratio as proposed by [Rasko DA et al.](http://bmcbioinformatics.biom
 
 ## News
 
-## 3.3.6 - 2024-06-12
+## 3.3.7 - 2024-06-27
 
-- Added support for translation tables different than 11 to UniprotFinder and AlleleCallEvaluator.
-
-- Added check for legacy schemas that include files terminating in `bsr.txt`. The AlleleCall module warns users that the schema needs to be adapted and exits.
-
-- Changed the `max_targets` value in UniprotFinder to avoid BLASTp warning when aligning schema representative alleles against proteomes.
-
-- Fixed an issue in the AlleleCallEvaluator module when using `--no-pa` and `--no-dm`.
-
-- The AlleleCallEvaluator module no longer tries to compute the distance matrix, MSA, and tree if the cgMLST is composed of 0 loci.
-
-- Fixed an issue in RemoveGenes where it would not get the first ID in the input list.
-
-- Updated Dockerfile. Using pip to install chewBBACA instead of downloading source from GitHub.
+- Fixed issue in the PrepExternalSchema module related to the adaptation of small loci (BLASTp would not report the self-alignment). 
 
 Check our [Changelog](https://github.com/B-UMMI/chewBBACA/blob/master/CHANGELOG.md) to learn about the latest changes.
 

diff --git a/pyproject.toml b/pyproject.toml
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "chewBBACA"
-version = "3.3.6"
+version = "3.3.7"
 requires-python = ">=3.8"
 dependencies = [
     "numpy~=1.24.3",