Merge pull request #34 from B-UMMI/fix_ci_v3

Up github action checkout version
B-UMMI · Dec 7, 2022 · 29ae963 · 29ae963
2 parents 1437ce1 + 4b89a04
commit 29ae963
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diff --git a/.github/workflows/ci_nextflow.yml b/.github/workflows/ci_nextflow.yml
@@ -13,7 +13,7 @@ jobs:
       matrix:
         nxf_ver: ['21.04.1', '']
     steps:
-      - uses: actions/checkout@v2.3.4
+      - uses: actions/checkout@v3
       - name: Install Nextflow
         run: |
           export NXF_VER=${{ matrix.nxf_ver }}

diff --git a/.github/workflows/ci_templates.yml b/.github/workflows/ci_templates.yml
@@ -14,7 +14,9 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
+      - name: Set up Python 3.8
+        uses: actions/setup-python@v3
         with:
          python-version: 3.8
 

diff --git a/docker/LMAS/requirements.txt b/docker/LMAS/requirements.txt
@@ -43,7 +43,7 @@ nest-asyncio
 notebook==6.0.3
 numpy
 packaging
-pandas==1.1.3
+pandas==1.5.1
 pandocfilters==1.4.2
 parso
 pathtools==0.1.2