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Update readme.md
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AstraBert authored Dec 16, 2023
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Expand Up @@ -12,12 +12,12 @@ The names of the loci are hereby reported, alongside with the species they where
To generate data in Linux, run:

```bash
simON_reads.py -i reference.fasta -snp 28S-rRNA:3:G>T,28S-rRNA:41:C>G,S7:0:A>G,S7:63:C>T -n 1000 > test.fastq
simON_reads.py -i reference.fasta -snp "28S-rRNA:3:G>T,28S-rRNA:41:C>G,S7:0:A>G,S7:63:C>T" -n 1000 > test.fastq
```

If you are in Windows:
```powershell
python3 .\simON_reads.py -i .\reference.fasta -snp 28S-rRNA:3:G>T,28S-rRNA:41:C>G,S7:0:A>G,S7:63:C>T -n 1000 > .\test.fastq
python3 .\simON_reads.py -i .\reference.fasta -snp "28S-rRNA:3:G>T,28S-rRNA:41:C>G,S7:0:A>G,S7:63:C>T" -n 1000 > .\test.fastq
```

Always remember to redirect the stream to your desidered file, unless you want it to be printed on the standard output of your terminal.

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