Code

improvements in phenotype calculation#88

Code

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abearab merged 46 commits intomasterArcInstitute/ScreenPro2:masterfrom devArcInstitute/ScreenPro2:devCopy head branch name to clipboardAug 6, 2024

+400-302

Commits

Commits on Aug 2, 2024

• add text loc args

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• clearify formula

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• add docs

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• Merge branch 'master' into dev

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• Merge branch 'master' into dev

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• mend

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• update log10 count transformation

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• change test level

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• mend

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• fix a bug

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• mend

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Commits on Aug 4, 2024

• add _averageBestN

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• mend

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• update module organization

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• add calcLog2e and clean up

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• code clean up

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• code clean up

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• mend

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• refactor adata to adat

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Commits on Aug 5, 2024

• major changes in runPhenoScore

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Commits on Aug 6, 2024

• fix a bug

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• add target column

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• add buildPhenotypeData

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• mend

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• draft buildPhenotypeData

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• add compareByReplicates

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• add compareByReplicates

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• refactor to _annotate

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• draft empiricalFDR to implement later

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• mend

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• bump version 0.4.9

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