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Fixed bug and typos in Ch_advanced_spikes_input notebook
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564 changes: 460 additions & 104 deletions
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docs/tutorial/03_opt_advanced_spiking_inputs/Ch_advanced_spikes_input.ipynb
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docs/tutorial/03_opt_advanced_spiking_inputs/ecephys_cache_dir/channels.csv
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docs/tutorial/03_opt_advanced_spiking_inputs/ecephys_cache_dir/neuropixels.manifest.json
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{ | ||
"manifest": [ | ||
{ | ||
"type": "manifest_version", | ||
"value": "0.3.0" | ||
}, | ||
{ | ||
"key": "BASEDIR", | ||
"type": "dir", | ||
"spec": "." | ||
}, | ||
{ | ||
"key": "sessions", | ||
"type": "file", | ||
"spec": "sessions.csv", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "probes", | ||
"type": "file", | ||
"spec": "probes.csv", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "channels", | ||
"type": "file", | ||
"spec": "channels.csv", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "units", | ||
"type": "file", | ||
"spec": "units.csv", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "session_data", | ||
"type": "dir", | ||
"spec": "session_%d", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "session_nwb", | ||
"type": "file", | ||
"spec": "session_%d.nwb", | ||
"parent_key": "session_data" | ||
}, | ||
{ | ||
"key": "session_analysis_metrics", | ||
"type": "file", | ||
"spec": "session_%d_analysis_metrics.csv", | ||
"parent_key": "session_data" | ||
}, | ||
{ | ||
"key": "probe_lfp_nwb", | ||
"type": "file", | ||
"spec": "probe_%d_lfp.nwb", | ||
"parent_key": "session_data" | ||
}, | ||
{ | ||
"key": "movie_dir", | ||
"type": "dir", | ||
"spec": "natural_movie_templates", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "typewise_analysis_metrics", | ||
"type": "file", | ||
"spec": "%s_analysis_metrics.csv", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "natural_movie", | ||
"type": "file", | ||
"spec": "natural_movie_%d.h5", | ||
"parent_key": "movie_dir" | ||
}, | ||
{ | ||
"key": "natural_scene_dir", | ||
"type": "dir", | ||
"spec": "natural_scene_templates", | ||
"parent_key": "BASEDIR" | ||
}, | ||
{ | ||
"key": "natural_scene", | ||
"type": "file", | ||
"spec": "natural_scene_%d.tiff", | ||
"parent_key": "natural_scene_dir" | ||
} | ||
] | ||
} |
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docs/tutorial/03_opt_advanced_spiking_inputs/ecephys_cache_dir/probes.csv
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docs/tutorial/03_opt_advanced_spiking_inputs/ecephys_cache_dir/sessions.csv
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id,date_of_acquisition,isi_experiment_id,published_at,specimen_id,session_type,age_in_days,sex,genotype,has_nwb | ||
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847657808,2019-04-08T19:30:50Z,836962226,2019-10-03T00:00:00Z,827809884,functional_connectivity,126.0,F,wt/wt,True |
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