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question: readPlinkToMatrixByIndex #14

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complexgenome opened this issue Dec 16, 2020 · 0 comments
Open

question: readPlinkToMatrixByIndex #14

complexgenome opened this issue Dec 16, 2020 · 0 comments

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@complexgenome
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Hi developer,

Thanks for this library. I would like to process data where sample size is 200K+ using following function:

readPlinkToMatrixByIndex(plinkFilePrefix, sampleIndex, markerIndex)

I would like know:
Does the plink file loaded into the library first, or, there are read in chunks?

I am developing pipeline for the 200K in plink file per chromosome basis.

Thank you.

https://rdrr.io/cran/seqminer/man/readPlinkToMatrixByIndex.html
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@complexgenome