NAMESPACE

# Generated by roxygen2: do not edit by hand

export(GeneStats)
export(clusterings.compare)
export(construct)
export(copyCellMeta)
export(copyGeneMeta)
export(getAssociationTable)
export(getCellMeta)
export(getCellNum)
export(getCellType)
export(getCellTypeEnrichment)
export(getCellTypeMarkers)
export(getCellTypeValidation)
export(getCells)
export(getDF)
export(getDiffGenes)
export(getDiffTest)
export(getES)
export(getExpression)
export(getGeneMeta)
export(getGeneNum)
export(getGenes)
export(getGenesForClustering)
export(getHC)
export(getPCA)
export(getSigGenes)
export(getSigValidation)
export(getTFs)
export(getTSNE)
export(setAssociationTable)
export(setCellMeta)
export(setCellNames)
export(setCellType)
export(setCellTypeEnrichment)
export(setCellTypeMarkers)
export(setCellTypeValidation)
export(setDF)
export(setDiffGenes)
export(setDiffTest)
export(setES)
export(setExpression)
export(setGeneMeta)
export(setGeneNames)
export(setGenesForClustering)
export(setHC)
export(setPCA)
export(setSigGenes)
export(setSigValidation)
export(setTFs)
export(setTSNE)
export(specificity.thresholdSelection)
exportClasses(sincera)
exportMethods(batch.analysis)
exportMethods(celltype.validation)
exportMethods(celltype.enrichment)
exportMethods(cluster.assignment)
exportMethods(cluster.diffgenes)
exportMethods(cluster.geneSelection)
exportMethods(cluster.permutation.analysis)
exportMethods(doPCA)
exportMethods(doTSNE)
exportMethods(drivingforce.getLCC)
exportMethods(drivingforce.inferTRN)
exportMethods(drivingforce.rankTFs)
exportMethods(drivingforce.selectTFs)
exportMethods(drivingforce.selectTGs)
exportMethods(expr.minimum)
exportMethods(filterContaminatedCells)
exportMethods(filterLowQualityCells)
exportMethods(normalization.zscore)
exportMethods(plotCellTypeEnrichment)
exportMethods(plotHC)
exportMethods(plotHeatmap)
exportMethods(plotMarkers)
exportMethods(plotPCASD)
exportMethods(plotRDS)
exportMethods(prefilterGenes)
exportMethods(signature.prediction)
exportMethods(signature.validation)