DESCRIPTION

Package: RNAseqStat2
Type: Package
Title: A Pipeline to Process RNAseq Data
Version: 0.1.0.9993
Authors@R: c(
        person("Jianming","Zeng",
            email = "jmzeng1314@163.com",
            role = c("aut", "ctb")),
        person(given = "Yonghe",
           family = "Xia",
           role = c("aut", "ctb", "cre"),
           email = "xiayh17@gmail.com"),
        person("Biotrainee group",role = c("cph","fnd"))
    )
Maintainer: Yonghe Xia <xiayh17@gmail.com>
Description: More about what it does (maybe more than one line)
    Use four spaces when indenting paragraphs within the Description.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: 
    R (>= 4.1.0)
RoxygenNote: 7.2.3
BugReports: https://github.com/xiayh17/RNAseqStat2/issues
Suggests: 
    testthat (>= 3.0.0),
    covr,
    knitr,
    rmarkdown,
    pdftools,
    png
Imports: 
    fs,
    edgeR,
    glue,
    usethis,
    DESeq2,
    SummarizedExperiment,
    FactoMineR,
    factoextra,
    ggplot2,
    RColorBrewer,
    pheatmap,
    data.table,
    utils,
    ggrepel,
    stats,
    DOSE,
    clusterProfiler,
    kit,
    limma,
    methods,
    qvalue,
    grid,
    dplyr,
    forcats,
    ggnewscale,
    stringr,
    enrichplot,
    plyr,
    GSEABase,
    GSVA,
    msigdbr,
    AnnoProbe,
    ggtext,
    ggdist,
    ggridges,
    tibble,
    Cairo,
    ggfun,
    ggfittext,
    circlize,
    ComplexHeatmap,
    MetBrewer,
    textshape,
    reshape2,
    cowplot,
    VennDiagram,
    aplot (>= 0.0.7)
biocViews: DataImport, Microarray, OneChannel, SAGE, Software, TwoChannel
Config/testthat/edition: 3
VignetteBuilder: knitr