From f6a365645887c81c98cb5ecc7f0fada9b1e348ac Mon Sep 17 00:00:00 2001 From: yokochi47 Date: Thu, 1 Feb 2024 09:18:40 +0900 Subject: [PATCH] PEP8 cleanup --- wwpdb/utils/nmr/NmrDpUtility.py | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/wwpdb/utils/nmr/NmrDpUtility.py b/wwpdb/utils/nmr/NmrDpUtility.py index be4c415b2..784d0d343 100644 --- a/wwpdb/utils/nmr/NmrDpUtility.py +++ b/wwpdb/utils/nmr/NmrDpUtility.py @@ -25408,7 +25408,7 @@ def test_seq_id_offset(lp, index, row, _row, _idx, chain_id, seq_id, comp_id, of if not resolved and seq_id is not None and has_coordinate: - def test_seq_id_offset(lp, index, row, _row, _idx, chain_id, seq_id, comp_id, offset): + def test_seq_id_offset_as_is(lp, index, _row, _idx, chain_id, seq_id, comp_id, offset): _resolved = False _index = index @@ -25448,6 +25448,8 @@ def test_seq_id_offset(lp, index, row, _row, _idx, chain_id, seq_id, comp_id, of _row[22] = _row[18] if _row[23] in emptyValue: _row[23] = _row[19] + if _row[24] in emptyValue: + _row[24] = 'UNMAPPED' _index, _row = fill_cs_row(lp, index, _row, prefer_auth_atom_name, coord_atom_site, None, @@ -25466,13 +25468,13 @@ def test_seq_id_offset(lp, index, row, _row, _idx, chain_id, seq_id, comp_id, of found = False for offset in range(1, 1000): - resolved, _index, __row = test_seq_id_offset(lp, index, row, _row, idx, chain_id, seq_id, comp_id, offset) + resolved, _index, __row = test_seq_id_offset_as_is(lp, index, _row, idx, chain_id, seq_id, comp_id, offset) if resolved: index, _row = _index, __row break - resolved, _index, __row = test_seq_id_offset(lp, index, row, _row, idx, chain_id, seq_id, comp_id, -offset) + resolved, _index, __row = test_seq_id_offset_as_is(lp, index, _row, idx, chain_id, seq_id, comp_id, -offset) if resolved: index, _row = _index, __row