diff --git a/index2.md b/index2.md index d5a0ce47..31e8eacf 100644 --- a/index2.md +++ b/index2.md @@ -8,10 +8,6 @@ Read more about why these fails happen and how to fix them in these [instruction [WP108](reports/WP108#at-least-one-reference) [WP112](reports/WP112#at-least-one-reference) [WP121](reports/WP121#at-least-one-reference) [WP125](reports/WP125#at-least-one-reference) [WP133](reports/WP133#at-least-one-reference) [WP134](reports/WP134#at-least-one-reference) [WP135](reports/WP135#at-least-one-reference) [WP136](reports/WP136#at-least-one-reference) [WP137](reports/WP137#at-least-one-reference) [WP1396](reports/WP1396#at-least-one-reference) [WP1397](reports/WP1397#at-least-one-reference) [WP1398](reports/WP1398#at-least-one-reference) [WP142](reports/WP142#at-least-one-reference) [WP143](reports/WP143#at-least-one-reference) [WP1451](reports/WP1451#at-least-one-reference) [WP1466](reports/WP1466#at-least-one-reference) [WP1495](reports/WP1495#at-least-one-reference) [WP1496](reports/WP1496#at-least-one-reference) [WP1498](reports/WP1498#at-least-one-reference) [WP1538](reports/WP1538#at-least-one-reference) [WP154](reports/WP154#at-least-one-reference) [WP1541](reports/WP1541#at-least-one-reference) [WP1546](reports/WP1546#at-least-one-reference) [WP1559](reports/WP1559#at-least-one-reference) [WP158](reports/WP158#at-least-one-reference) [WP1581](reports/WP1581#at-least-one-reference) [WP159](reports/WP159#at-least-one-reference) [WP1596](reports/WP1596#at-least-one-reference) [WP16](reports/WP16#at-least-one-reference) [WP1603](reports/WP1603#at-least-one-reference) [WP163](reports/WP163#at-least-one-reference) [WP1631](reports/WP1631#at-least-one-reference) [WP1642](reports/WP1642#at-least-one-reference) [WP171](reports/WP171#at-least-one-reference) [WP1770](reports/WP1770#at-least-one-reference) [WP181](reports/WP181#at-least-one-reference) [WP186](reports/WP186#at-least-one-reference) [WP19](reports/WP19#at-least-one-reference) [WP1941](reports/WP1941#at-least-one-reference) [WP1946](reports/WP1946#at-least-one-reference) [WP198](reports/WP198#at-least-one-reference) [WP1992](reports/WP1992#at-least-one-reference) [WP1996](reports/WP1996#at-least-one-reference) [WP2018](reports/WP2018#at-least-one-reference) [WP2023](reports/WP2023#at-least-one-reference) [WP2037](reports/WP2037#at-least-one-reference) [WP206](reports/WP206#at-least-one-reference) [WP209](reports/WP209#at-least-one-reference) [WP210](reports/WP210#at-least-one-reference) [WP2113](reports/WP2113#at-least-one-reference) [WP2118](reports/WP2118#at-least-one-reference) [WP214](reports/WP214#at-least-one-reference) [WP218](reports/WP218#at-least-one-reference) [WP2185](reports/WP2185#at-least-one-reference) [WP219](reports/WP219#at-least-one-reference) [WP2197](reports/WP2197#at-least-one-reference) [WP2199](reports/WP2199#at-least-one-reference) [WP220](reports/WP220#at-least-one-reference) [WP2203](reports/WP2203#at-least-one-reference) [WP2204](reports/WP2204#at-least-one-reference) [WP2207](reports/WP2207#at-least-one-reference) [WP2212](reports/WP2212#at-least-one-reference) [WP224](reports/WP224#at-least-one-reference) [WP2249](reports/WP2249#at-least-one-reference) [WP2267](reports/WP2267#at-least-one-reference) [WP228](reports/WP228#at-least-one-reference) [WP2289](reports/WP2289#at-least-one-reference) [WP2292](reports/WP2292#at-least-one-reference) [WP231](reports/WP231#at-least-one-reference) [WP2324](reports/WP2324#at-least-one-reference) [WP2332](reports/WP2332#at-least-one-reference) [WP2333](reports/WP2333#at-least-one-reference) [WP234](reports/WP234#at-least-one-reference) [WP2355](reports/WP2355#at-least-one-reference) [WP2360](reports/WP2360#at-least-one-reference) [WP2376](reports/WP2376#at-least-one-reference) [WP238](reports/WP238#at-least-one-reference) [WP2380](reports/WP2380#at-least-one-reference) [WP24](reports/WP24#at-least-one-reference) [WP240](reports/WP240#at-least-one-reference) [WP2453](reports/WP2453#at-least-one-reference) [WP247](reports/WP247#at-least-one-reference) [WP2484](reports/WP2484#at-least-one-reference) [WP2485](reports/WP2485#at-least-one-reference) [WP25](reports/WP25#at-least-one-reference) [WP253](reports/WP253#at-least-one-reference) [WP256](reports/WP256#at-least-one-reference) [WP2562](reports/WP2562#at-least-one-reference) [WP2597](reports/WP2597#at-least-one-reference) [WP2603](reports/WP2603#at-least-one-reference) [WP261](reports/WP261#at-least-one-reference) [WP2623](reports/WP2623#at-least-one-reference) [WP2624](reports/WP2624#at-least-one-reference) [WP2630](reports/WP2630#at-least-one-reference) [WP269](reports/WP269#at-least-one-reference) [WP27](reports/WP27#at-least-one-reference) [WP280](reports/WP280#at-least-one-reference) [WP281](reports/WP281#at-least-one-reference) [WP2838](reports/WP2838#at-least-one-reference) [WP2839](reports/WP2839#at-least-one-reference) [WP2855](reports/WP2855#at-least-one-reference) [WP287](reports/WP287#at-least-one-reference) [WP2889](reports/WP2889#at-least-one-reference) [WP290](reports/WP290#at-least-one-reference) [WP2912](reports/WP2912#at-least-one-reference) [WP296](reports/WP296#at-least-one-reference) [WP299](reports/WP299#at-least-one-reference) [WP300](reports/WP300#at-least-one-reference) [WP3015](reports/WP3015#at-least-one-reference) [WP305](reports/WP305#at-least-one-reference) [WP307](reports/WP307#at-least-one-reference) [WP310](reports/WP310#at-least-one-reference) [WP312](reports/WP312#at-least-one-reference) [WP32](reports/WP32#at-least-one-reference) [WP321](reports/WP321#at-least-one-reference) [WP322](reports/WP322#at-least-one-reference) [WP324](reports/WP324#at-least-one-reference) [WP325](reports/WP325#at-least-one-reference) [WP33](reports/WP33#at-least-one-reference) [WP345](reports/WP345#at-least-one-reference) [WP346](reports/WP346#at-least-one-reference) [WP347](reports/WP347#at-least-one-reference) [WP355](reports/WP355#at-least-one-reference) [WP359](reports/WP359#at-least-one-reference) [WP3591](reports/WP3591#at-least-one-reference) [WP3594](reports/WP3594#at-least-one-reference) [WP36](reports/WP36#at-least-one-reference) [WP3602](reports/WP3602#at-least-one-reference) [WP361](reports/WP361#at-least-one-reference) [WP368](reports/WP368#at-least-one-reference) [WP369](reports/WP369#at-least-one-reference) [WP37](reports/WP37#at-least-one-reference) [WP372](reports/WP372#at-least-one-reference) [WP377](reports/WP377#at-least-one-reference) [WP380](reports/WP380#at-least-one-reference) [WP381](reports/WP381#at-least-one-reference) [WP383](reports/WP383#at-least-one-reference) [WP386](reports/WP386#at-least-one-reference) [WP387](reports/WP387#at-least-one-reference) [WP3896](reports/WP3896#at-least-one-reference) [WP39](reports/WP39#at-least-one-reference) [WP390](reports/WP390#at-least-one-reference) [WP394](reports/WP394#at-least-one-reference) [WP4008](reports/WP4008#at-least-one-reference) [WP4010](reports/WP4010#at-least-one-reference) [WP4022](reports/WP4022#at-least-one-reference) [WP406](reports/WP406#at-least-one-reference) [WP412](reports/WP412#at-least-one-reference) [WP4159](reports/WP4159#at-least-one-reference) [WP416](reports/WP416#at-least-one-reference) [WP4173](reports/WP4173#at-least-one-reference) [WP418](reports/WP418#at-least-one-reference) [WP4223](reports/WP4223#at-least-one-reference) [WP423](reports/WP423#at-least-one-reference) [WP43](reports/WP43#at-least-one-reference) [WP4320](reports/WP4320#at-least-one-reference) [WP4321](reports/WP4321#at-least-one-reference) [WP4335](reports/WP4335#at-least-one-reference) [WP436](reports/WP436#at-least-one-reference) [WP437](reports/WP437#at-least-one-reference) [WP454](reports/WP454#at-least-one-reference) [WP4558](reports/WP4558#at-least-one-reference) [WP4580](reports/WP4580#at-least-one-reference) [WP4586](reports/WP4586#at-least-one-reference) [WP4589](reports/WP4589#at-least-one-reference) [WP459](reports/WP459#at-least-one-reference) [WP46](reports/WP46#at-least-one-reference) [WP462](reports/WP462#at-least-one-reference) [WP463](reports/WP463#at-least-one-reference) [WP4661](reports/WP4661#at-least-one-reference) [WP467](reports/WP467#at-least-one-reference) [WP469](reports/WP469#at-least-one-reference) [WP470](reports/WP470#at-least-one-reference) [WP472](reports/WP472#at-least-one-reference) [WP477](reports/WP477#at-least-one-reference) [WP4815](reports/WP4815#at-least-one-reference) [WP489](reports/WP489#at-least-one-reference) [WP4914](reports/WP4914#at-least-one-reference) [WP4931](reports/WP4931#at-least-one-reference) [WP4944](reports/WP4944#at-least-one-reference) [WP498](reports/WP498#at-least-one-reference) [WP5026](reports/WP5026#at-least-one-reference) [WP503](reports/WP503#at-least-one-reference) [WP5034](reports/WP5034#at-least-one-reference) [WP504](reports/WP504#at-least-one-reference) [WP508](reports/WP508#at-least-one-reference) [WP5105](reports/WP5105#at-least-one-reference) [WP5154](reports/WP5154#at-least-one-reference) [WP5158](reports/WP5158#at-least-one-reference) [WP5189](reports/WP5189#at-least-one-reference) [WP5195](reports/WP5195#at-least-one-reference) [WP5205](reports/WP5205#at-least-one-reference) [WP5233](reports/WP5233#at-least-one-reference) [WP5290](reports/WP5290#at-least-one-reference) [WP537](reports/WP537#at-least-one-reference) [WP5389](reports/WP5389#at-least-one-reference) [WP539](reports/WP539#at-least-one-reference) [WP54](reports/WP54#at-least-one-reference) [WP540](reports/WP540#at-least-one-reference) [WP541](reports/WP541#at-least-one-reference) [WP5434](reports/WP5434#at-least-one-reference) [WP547](reports/WP547#at-least-one-reference) [WP55](reports/WP55#at-least-one-reference) [WP550](reports/WP550#at-least-one-reference) [WP552](reports/WP552#at-least-one-reference) [WP555](reports/WP555#at-least-one-reference) [WP556](reports/WP556#at-least-one-reference) [WP558](reports/WP558#at-least-one-reference) [WP559](reports/WP559#at-least-one-reference) [WP562](reports/WP562#at-least-one-reference) [WP57](reports/WP57#at-least-one-reference) [WP575](reports/WP575#at-least-one-reference) [WP578](reports/WP578#at-least-one-reference) [WP579](reports/WP579#at-least-one-reference) [WP58](reports/WP58#at-least-one-reference) [WP590](reports/WP590#at-least-one-reference) [WP60](reports/WP60#at-least-one-reference) [WP62](reports/WP62#at-least-one-reference) [WP65](reports/WP65#at-least-one-reference) [WP66](reports/WP66#at-least-one-reference) [WP662](reports/WP662#at-least-one-reference) [WP67](reports/WP67#at-least-one-reference) [WP680](reports/WP680#at-least-one-reference) [WP69](reports/WP69#at-least-one-reference) [WP70](reports/WP70#at-least-one-reference) [WP71](reports/WP71#at-least-one-reference) [WP723](reports/WP723#at-least-one-reference) [WP77](reports/WP77#at-least-one-reference) [WP80](reports/WP80#at-least-one-reference) [WP84](reports/WP84#at-least-one-reference) [WP88](reports/WP88#at-least-one-reference) [WP91](reports/WP91#at-least-one-reference) [WP99](reports/WP99#at-least-one-reference) -## ChEBIMetabolitesTests.faultyChEBIChEBIIdentifiers - -[WP4906](reports/WP4906#chebimetabolitestestsfaultychebichebiidentifiers) - ## Data nodes without an identifier @@ -26,14 +22,6 @@ Read more about why these fails happen and how to fix them in these [instruction [WP1403](reports/WP1403#datanodes-of-unknown-type) [WP1584](reports/WP1584#datanodes-of-unknown-type) [WP1995](reports/WP1995#datanodes-of-unknown-type) [WP2209](reports/WP2209#datanodes-of-unknown-type) [WP2226](reports/WP2226#datanodes-of-unknown-type) [WP2231](reports/WP2231#datanodes-of-unknown-type) [WP2263](reports/WP2263#datanodes-of-unknown-type) [WP2276](reports/WP2276#datanodes-of-unknown-type) [WP2287](reports/WP2287#datanodes-of-unknown-type) [WP2333](reports/WP2333#datanodes-of-unknown-type) [WP2353](reports/WP2353#datanodes-of-unknown-type) [WP2355](reports/WP2355#datanodes-of-unknown-type) [WP2456](reports/WP2456#datanodes-of-unknown-type) [WP2509](reports/WP2509#datanodes-of-unknown-type) [WP2513](reports/WP2513#datanodes-of-unknown-type) [WP2569](reports/WP2569#datanodes-of-unknown-type) [WP2571](reports/WP2571#datanodes-of-unknown-type) [WP2579](reports/WP2579#datanodes-of-unknown-type) [WP2583](reports/WP2583#datanodes-of-unknown-type) [WP2586](reports/WP2586#datanodes-of-unknown-type) [WP2840](reports/WP2840#datanodes-of-unknown-type) [WP2841](reports/WP2841#datanodes-of-unknown-type) [WP2857](reports/WP2857#datanodes-of-unknown-type) [WP2882](reports/WP2882#datanodes-of-unknown-type) [WP2915](reports/WP2915#datanodes-of-unknown-type) [WP2943](reports/WP2943#datanodes-of-unknown-type) [WP3617](reports/WP3617#datanodes-of-unknown-type) [WP3630](reports/WP3630#datanodes-of-unknown-type) [WP3668](reports/WP3668#datanodes-of-unknown-type) [WP3879](reports/WP3879#datanodes-of-unknown-type) [WP3982](reports/WP3982#datanodes-of-unknown-type) [WP4172](reports/WP4172#datanodes-of-unknown-type) [WP4239](reports/WP4239#datanodes-of-unknown-type) [WP4241](reports/WP4241#datanodes-of-unknown-type) [WP4329](reports/WP4329#datanodes-of-unknown-type) [WP4347](reports/WP4347#datanodes-of-unknown-type) [WP4348](reports/WP4348#datanodes-of-unknown-type) [WP4364](reports/WP4364#datanodes-of-unknown-type) [WP4397](reports/WP4397#datanodes-of-unknown-type) [WP4400](reports/WP4400#datanodes-of-unknown-type) [WP4478](reports/WP4478#datanodes-of-unknown-type) [WP4628](reports/WP4628#datanodes-of-unknown-type) [WP4629](reports/WP4629#datanodes-of-unknown-type) [WP4853](reports/WP4853#datanodes-of-unknown-type) [WP4880](reports/WP4880#datanodes-of-unknown-type) [WP4946](reports/WP4946#datanodes-of-unknown-type) [WP4970](reports/WP4970#datanodes-of-unknown-type) [WP5023](reports/WP5023#datanodes-of-unknown-type) [WP5024](reports/WP5024#datanodes-of-unknown-type) [WP5025](reports/WP5025#datanodes-of-unknown-type) [WP5027](reports/WP5027#datanodes-of-unknown-type) [WP5035](reports/WP5035#datanodes-of-unknown-type) [WP5036](reports/WP5036#datanodes-of-unknown-type) [WP5044](reports/WP5044#datanodes-of-unknown-type) [WP5046](reports/WP5046#datanodes-of-unknown-type) [WP5074](reports/WP5074#datanodes-of-unknown-type) [WP5088](reports/WP5088#datanodes-of-unknown-type) [WP5091](reports/WP5091#datanodes-of-unknown-type) [WP5101](reports/WP5101#datanodes-of-unknown-type) [WP5102](reports/WP5102#datanodes-of-unknown-type) [WP5103](reports/WP5103#datanodes-of-unknown-type) [WP5104](reports/WP5104#datanodes-of-unknown-type) [WP5105](reports/WP5105#datanodes-of-unknown-type) [WP5108](reports/WP5108#datanodes-of-unknown-type) [WP5109](reports/WP5109#datanodes-of-unknown-type) [WP5110](reports/WP5110#datanodes-of-unknown-type) [WP5111](reports/WP5111#datanodes-of-unknown-type) [WP5112](reports/WP5112#datanodes-of-unknown-type) [WP5117](reports/WP5117#datanodes-of-unknown-type) [WP5120](reports/WP5120#datanodes-of-unknown-type) [WP5140](reports/WP5140#datanodes-of-unknown-type) [WP5146](reports/WP5146#datanodes-of-unknown-type) [WP5149](reports/WP5149#datanodes-of-unknown-type) [WP5150](reports/WP5150#datanodes-of-unknown-type) [WP5187](reports/WP5187#datanodes-of-unknown-type) [WP5189](reports/WP5189#datanodes-of-unknown-type) [WP5219](reports/WP5219#datanodes-of-unknown-type) [WP5221](reports/WP5221#datanodes-of-unknown-type) [WP5222](reports/WP5222#datanodes-of-unknown-type) [WP5223](reports/WP5223#datanodes-of-unknown-type) [WP5224](reports/WP5224#datanodes-of-unknown-type) [WP5233](reports/WP5233#datanodes-of-unknown-type) [WP5235](reports/WP5235#datanodes-of-unknown-type) [WP5238](reports/WP5238#datanodes-of-unknown-type) [WP5269](reports/WP5269#datanodes-of-unknown-type) [WP5283](reports/WP5283#datanodes-of-unknown-type) [WP5290](reports/WP5290#datanodes-of-unknown-type) [WP5318](reports/WP5318#datanodes-of-unknown-type) [WP5342](reports/WP5342#datanodes-of-unknown-type) [WP5343](reports/WP5343#datanodes-of-unknown-type) [WP5372](reports/WP5372#datanodes-of-unknown-type) [WP5373](reports/WP5373#datanodes-of-unknown-type) [WP5376](reports/WP5376#datanodes-of-unknown-type) [WP5380](reports/WP5380#datanodes-of-unknown-type) [WP5385](reports/WP5385#datanodes-of-unknown-type) [WP5389](reports/WP5389#datanodes-of-unknown-type) [WP5397](reports/WP5397#datanodes-of-unknown-type) [WP5406](reports/WP5406#datanodes-of-unknown-type) [WP5420](reports/WP5420#datanodes-of-unknown-type) [WP5422](reports/WP5422#datanodes-of-unknown-type) [WP5424](reports/WP5424#datanodes-of-unknown-type) [WP5441](reports/WP5441#datanodes-of-unknown-type) [WP5444](reports/WP5444#datanodes-of-unknown-type) [WP5445](reports/WP5445#datanodes-of-unknown-type) [WP5446](reports/WP5446#datanodes-of-unknown-type) [WP5447](reports/WP5447#datanodes-of-unknown-type) [WP5473](reports/WP5473#datanodes-of-unknown-type) -## GeneTests.entrezGeneIdentifiersNotNumber - -[WP4906](reports/WP4906#genetestsentrezgeneidentifiersnotnumber) - -## GeneralTests.emptyLabelOfNodeWithIdentifier - -[WP4906](reports/WP4906#generaltestsemptylabelofnodewithidentifier) - ## InteractionTests.interactionsWithLabels [WP1425](reports/WP1425#interactiontestsinteractionswithlabels) [WP1433](reports/WP1433#interactiontestsinteractionswithlabels) [WP1434](reports/WP1434#interactiontestsinteractionswithlabels) [WP1438](reports/WP1438#interactiontestsinteractionswithlabels) [WP1451](reports/WP1451#interactiontestsinteractionswithlabels) [WP1453](reports/WP1453#interactiontestsinteractionswithlabels) [WP1461](reports/WP1461#interactiontestsinteractionswithlabels) [WP1471](reports/WP1471#interactiontestsinteractionswithlabels) [WP1487](reports/WP1487#interactiontestsinteractionswithlabels) [WP1488](reports/WP1488#interactiontestsinteractionswithlabels) [WP1489](reports/WP1489#interactiontestsinteractionswithlabels) [WP1495](reports/WP1495#interactiontestsinteractionswithlabels) [WP1496](reports/WP1496#interactiontestsinteractionswithlabels) [WP1526](reports/WP1526#interactiontestsinteractionswithlabels) [WP1528](reports/WP1528#interactiontestsinteractionswithlabels) [WP1530](reports/WP1530#interactiontestsinteractionswithlabels) [WP1531](reports/WP1531#interactiontestsinteractionswithlabels) [WP1539](reports/WP1539#interactiontestsinteractionswithlabels) [WP1541](reports/WP1541#interactiontestsinteractionswithlabels) [WP1544](reports/WP1544#interactiontestsinteractionswithlabels) [WP1584](reports/WP1584#interactiontestsinteractionswithlabels) [WP1589](reports/WP1589#interactiontestsinteractionswithlabels) [WP1591](reports/WP1591#interactiontestsinteractionswithlabels) [WP1596](reports/WP1596#interactiontestsinteractionswithlabels) [WP1601](reports/WP1601#interactiontestsinteractionswithlabels) [WP1602](reports/WP1602#interactiontestsinteractionswithlabels) [WP1603](reports/WP1603#interactiontestsinteractionswithlabels) [WP1604](reports/WP1604#interactiontestsinteractionswithlabels) [WP1622](reports/WP1622#interactiontestsinteractionswithlabels) [WP1667](reports/WP1667#interactiontestsinteractionswithlabels) [WP1742](reports/WP1742#interactiontestsinteractionswithlabels) [WP1772](reports/WP1772#interactiontestsinteractionswithlabels) [WP1963](reports/WP1963#interactiontestsinteractionswithlabels) [WP1964](reports/WP1964#interactiontestsinteractionswithlabels) [WP1965](reports/WP1965#interactiontestsinteractionswithlabels) [WP1968](reports/WP1968#interactiontestsinteractionswithlabels) [WP1981](reports/WP1981#interactiontestsinteractionswithlabels) [WP1982](reports/WP1982#interactiontestsinteractionswithlabels) [WP1995](reports/WP1995#interactiontestsinteractionswithlabels) [WP2018](reports/WP2018#interactiontestsinteractionswithlabels) [WP2034](reports/WP2034#interactiontestsinteractionswithlabels) [WP2035](reports/WP2035#interactiontestsinteractionswithlabels) [WP2036](reports/WP2036#interactiontestsinteractionswithlabels) [WP2037](reports/WP2037#interactiontestsinteractionswithlabels) [WP2038](reports/WP2038#interactiontestsinteractionswithlabels) [WP2059](reports/WP2059#interactiontestsinteractionswithlabels) [WP2064](reports/WP2064#interactiontestsinteractionswithlabels) [WP2067](reports/WP2067#interactiontestsinteractionswithlabels) [WP2118](reports/WP2118#interactiontestsinteractionswithlabels) [WP2141](reports/WP2141#interactiontestsinteractionswithlabels) [WP2148](reports/WP2148#interactiontestsinteractionswithlabels) [WP2203](reports/WP2203#interactiontestsinteractionswithlabels) [WP2227](reports/WP2227#interactiontestsinteractionswithlabels) [WP2229](reports/WP2229#interactiontestsinteractionswithlabels) [WP2231](reports/WP2231#interactiontestsinteractionswithlabels) [WP2234](reports/WP2234#interactiontestsinteractionswithlabels) [WP2235](reports/WP2235#interactiontestsinteractionswithlabels) [WP2263](reports/WP2263#interactiontestsinteractionswithlabels) [WP2267](reports/WP2267#interactiontestsinteractionswithlabels) [WP2272](reports/WP2272#interactiontestsinteractionswithlabels) [WP2276](reports/WP2276#interactiontestsinteractionswithlabels) [WP2292](reports/WP2292#interactiontestsinteractionswithlabels) [WP2313](reports/WP2313#interactiontestsinteractionswithlabels) [WP2316](reports/WP2316#interactiontestsinteractionswithlabels) [WP2324](reports/WP2324#interactiontestsinteractionswithlabels) [WP2328](reports/WP2328#interactiontestsinteractionswithlabels) [WP2332](reports/WP2332#interactiontestsinteractionswithlabels) [WP2355](reports/WP2355#interactiontestsinteractionswithlabels) [WP2371](reports/WP2371#interactiontestsinteractionswithlabels) 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[WP5294](reports/WP5294#interactiontestsinteractionswithlabels) [WP5300](reports/WP5300#interactiontestsinteractionswithlabels) [WP5304](reports/WP5304#interactiontestsinteractionswithlabels) [WP5312](reports/WP5312#interactiontestsinteractionswithlabels) [WP5321](reports/WP5321#interactiontestsinteractionswithlabels) [WP5331](reports/WP5331#interactiontestsinteractionswithlabels) [WP5333](reports/WP5333#interactiontestsinteractionswithlabels) [WP5342](reports/WP5342#interactiontestsinteractionswithlabels) [WP5343](reports/WP5343#interactiontestsinteractionswithlabels) [WP5345](reports/WP5345#interactiontestsinteractionswithlabels) [WP5346](reports/WP5346#interactiontestsinteractionswithlabels) [WP5347](reports/WP5347#interactiontestsinteractionswithlabels) [WP5348](reports/WP5348#interactiontestsinteractionswithlabels) [WP5352](reports/WP5352#interactiontestsinteractionswithlabels) [WP5353](reports/WP5353#interactiontestsinteractionswithlabels) [WP5355](reports/WP5355#interactiontestsinteractionswithlabels) [WP5356](reports/WP5356#interactiontestsinteractionswithlabels) [WP5360](reports/WP5360#interactiontestsinteractionswithlabels) [WP5362](reports/WP5362#interactiontestsinteractionswithlabels) [WP5365](reports/WP5365#interactiontestsinteractionswithlabels) [WP5366](reports/WP5366#interactiontestsinteractionswithlabels) [WP5367](reports/WP5367#interactiontestsinteractionswithlabels) [WP5376](reports/WP5376#interactiontestsinteractionswithlabels) [WP5380](reports/WP5380#interactiontestsinteractionswithlabels) [WP5381](reports/WP5381#interactiontestsinteractionswithlabels) [WP5382](reports/WP5382#interactiontestsinteractionswithlabels) [WP5399](reports/WP5399#interactiontestsinteractionswithlabels) [WP5401](reports/WP5401#interactiontestsinteractionswithlabels) [WP5402](reports/WP5402#interactiontestsinteractionswithlabels) [WP5406](reports/WP5406#interactiontestsinteractionswithlabels) [WP5407](reports/WP5407#interactiontestsinteractionswithlabels) [WP5408](reports/WP5408#interactiontestsinteractionswithlabels) [WP5414](reports/WP5414#interactiontestsinteractionswithlabels) [WP5420](reports/WP5420#interactiontestsinteractionswithlabels) [WP5422](reports/WP5422#interactiontestsinteractionswithlabels) [WP5434](reports/WP5434#interactiontestsinteractionswithlabels) [WP5440](reports/WP5440#interactiontestsinteractionswithlabels) [WP5443](reports/WP5443#interactiontestsinteractionswithlabels) [WP5485](reports/WP5485#interactiontestsinteractionswithlabels) diff --git a/reports/WP4787.md b/reports/WP4787.md index 383caf9c..716d900e 100644 --- a/reports/WP4787.md +++ b/reports/WP4787.md @@ -51,25 +51,25 @@ Interactions found that involve Labels: 19 ``` -http://classic.wikipathways.org/instance/WP4787_r135074 "Mesenchymal progenitor / +http://classic.wikipathways.org/instance/WP4787_r135101 "Deletion of OSX" with graphId dffd9 +http://classic.wikipathways.org/instance/WP4787_r135101 "Osteoblast" with graphId c2507 +http://classic.wikipathways.org/instance/WP4787_r135101 "Osteocyte" with graphId d893f +http://classic.wikipathways.org/instance/WP4787_r135101 "Chondrocyte" with graphId ed28d +http://classic.wikipathways.org/instance/WP4787_r135101 "Chondroblast" with graphId e3d35 +http://classic.wikipathways.org/instance/WP4787_r135101 "Calvarian bones, clavicles" with graphId d9440 +http://classic.wikipathways.org/instance/WP4787_r135101 "Osteoblast" with graphId eed50 +http://classic.wikipathways.org/instance/WP4787_r135101 "SOX9+" with graphId d5eca +http://classic.wikipathways.org/instance/WP4787_r135101 "RUNX2+" with graphId b9988 +http://classic.wikipathways.org/instance/WP4787_r135101 "Osteo-chondro progenitor" with graphId ea262 +http://classic.wikipathways.org/instance/WP4787_r135101 "Mesenchymal progenitor / Mesenchymal stem cell" with graphId db64d -http://classic.wikipathways.org/instance/WP4787_r135074 "Myogenic lineage" with graphId dbca1 -http://classic.wikipathways.org/instance/WP4787_r135074 "Deletion of OSX" with graphId dffd9 -http://classic.wikipathways.org/instance/WP4787_r135074 "Osteoblast" with graphId c2507 -http://classic.wikipathways.org/instance/WP4787_r135074 "SOX9+" with graphId d5eca -http://classic.wikipathways.org/instance/WP4787_r135074 "RUNX2+" with graphId b9988 -http://classic.wikipathways.org/instance/WP4787_r135074 "RUNX2+, OSX+" with graphId c27f3 -http://classic.wikipathways.org/instance/WP4787_r135074 "Perichondral cell" with graphId de89e -http://classic.wikipathways.org/instance/WP4787_r135074 "Osteo-chondro progenitor" with graphId ea262 -http://classic.wikipathways.org/instance/WP4787_r135074 "Chondrocyte" with graphId ed28d -http://classic.wikipathways.org/instance/WP4787_r135074 "Chondroblast" with graphId e3d35 -http://classic.wikipathways.org/instance/WP4787_r135074 "Preosteoblast" with graphId ff887 -http://classic.wikipathways.org/instance/WP4787_r135074 "Osteocyte" with graphId d893f -http://classic.wikipathways.org/instance/WP4787_r135074 "Osteoblast" with graphId eed50 -http://classic.wikipathways.org/instance/WP4787_r135074 "Hypertrophic chondrocyte" with graphId f9554 -http://classic.wikipathways.org/instance/WP4787_r135074 "Deletion of beta-catenin gene" with graphId fa75d -http://classic.wikipathways.org/instance/WP4787_r135074 "Axial skeleton, extremities" with graphId bc86b -http://classic.wikipathways.org/instance/WP4787_r135074 "Calvarian bones, clavicles" with graphId d9440 -http://classic.wikipathways.org/instance/WP4787_r135074 "Adipogenic lineage" with graphId a576b +http://classic.wikipathways.org/instance/WP4787_r135101 "RUNX2+, OSX+" with graphId c27f3 +http://classic.wikipathways.org/instance/WP4787_r135101 "Perichondral cell" with graphId de89e +http://classic.wikipathways.org/instance/WP4787_r135101 "Preosteoblast" with graphId ff887 +http://classic.wikipathways.org/instance/WP4787_r135101 "Deletion of beta-catenin gene" with graphId fa75d +http://classic.wikipathways.org/instance/WP4787_r135101 "Myogenic lineage" with graphId dbca1 +http://classic.wikipathways.org/instance/WP4787_r135101 "Adipogenic lineage" with graphId a576b +http://classic.wikipathways.org/instance/WP4787_r135101 "Axial skeleton, extremities" with graphId bc86b +http://classic.wikipathways.org/instance/WP4787_r135101 "Hypertrophic chondrocyte" with graphId f9554 ``` diff --git a/reports/WP4861.md b/reports/WP4861.md index 6f861728..931b9b95 100644 --- a/reports/WP4861.md +++ b/reports/WP4861.md @@ -48,25 +48,25 @@ The following DataNodes have no identifier: 11 -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c90ec (Amino acid synthesis +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/c90ec (Amino acid synthesis Antioxidant response Apoptosis) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/e0713 (C/EBP +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/e0713 (C/EBP CCAAT enhancer binding protein) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/d0da6 (CRE +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/d0da6 (CRE cAMP response element) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c085b (ER protein chaperones +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/c085b (ER protein chaperones Lipid biosynthesis ER-associated degradation) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/e9fd9 (ER-associated +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/e9fd9 (ER-associated mRNA) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/ed36d (Global protein +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/ed36d (Global protein translation) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/d43bc (MERS 4a) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/c094e (RIDD) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/a4bee (SARS 8ab) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/dc80b (SARS, IBV infection) -* [http://classic.wikipathways.org/instance/WP4861_r124658](http://classic.wikipathways.org/instance/WP4861_r124658) http://rdf.wikipathways.org/Pathway/WP4861_r124658/DataNode/cd9a0 (SARS, OC43, +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/d43bc (MERS 4a) +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/c094e (RIDD) +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/a4bee (SARS 8ab) +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/dc80b (SARS, IBV infection) +* [http://classic.wikipathways.org/instance/WP4861_r135076](http://classic.wikipathways.org/instance/WP4861_r135076) http://rdf.wikipathways.org/Pathway/WP4861_r135076/DataNode/cd9a0 (SARS, OC43, MHV, IBV infection) diff --git a/reports/WP4906.json b/reports/WP4906.json index 820225cc..59664681 100644 --- a/reports/WP4906.json +++ b/reports/WP4906.json @@ -1,6 +1,6 @@ { "schemaVersion": 1, "label": "curation", - "message": "5 issues", + "message": "2 issues", "color": "red" } diff --git a/reports/WP4906.md b/reports/WP4906.md index dc730ac7..c761cb05 100644 --- a/reports/WP4906.md +++ b/reports/WP4906.md @@ -6,45 +6,18 @@ * Scholia: [WP4906](https://scholia.toolforge.org/wikipathways/WP4906) ## Tests * CASMetabolitesTests: all 2 tests OK! -* ChEBIMetabolitesTests - * secondaryChEBIIdentifiers: .. all OK! - * faultyChEBIIdentifiers: .. all OK! - * chebiDataTypo: . all OK! - * faultyChEBIChEBIIdentifiers: x we found 1 problem(s): - * [Faulty ChEBI identifiers detected: 2](#eb2972d0) - * neutralIons: .. all OK! +* ChEBIMetabolitesTests: all 5 tests OK! * ChemSpiderTests: all 2 tests OK! * DataNodesTests * dataNodesWithoutIdentifier: .x we found 1 problem(s): - * [The following DataNodes have no identifier: 2](#d2d32fa1) + * [The following DataNodes have no identifier: 3](#d2d32fa2) * unknownTypes_knownDatasource: .. all OK! * unknownTypes: .. all OK! * unknownTypes_Reactome: .. all OK! * otherDataSource: .. all OK! * EnsemblTests: all 4 tests OK! -* GeneTests - * entrezGeneIdentifiersNotNumber: .x we found 1 problem(s): - * [Entrez Gene identifiers that are not numbers: 1](#39c5c867) - * affyProbeIdentifiersNotCorrect: .. all OK! - * outdatedIdentifiers: .... all OK! - * nonNumericHGNCAccessionNumbers: .. all OK! -* GeneralTests - * curationAndHypothetical: .. all OK! - * curationAndNeedsWork: .. all OK! - * curationAndReactome: .. all OK! - * dataNodeWithoutGraphId: .. all OK! - * duplicateTitles: .. all OK! - * emptyDataSources: . all OK! - * emptyLabelOfNodeWithIdentifier: .x we found 1 problem(s): - * [Data nodes with an identifier but empty label: 1](#a07a01aa) - * groupsHaveDetail: .. all OK! - * noTags: .. all OK! - * nullDataSources: .. all OK! - * stockComments: .. all OK! - * titlesShortEnough: .. all OK! - * undefinedDataSources: .. all OK! - * undefinedIdentifier: .. all OK! - * weirdCharacterTitles: .. all OK! +* GeneTests: all 4 tests OK! +* GeneralTests: all 15 tests OK! * HMDBSecMetabolitesTests: all 3 tests OK! * InteractionTests * noMetaboliteToNonMetaboliteConversions: .. all OK! @@ -74,56 +47,29 @@ * Number of test classes: 20 * Number of tests: 117 * Number of assertions: 235 -* Number of fails: 5 +* Number of fails: 2 ## Fails - - -## ChEBIMetabolitesTests.faultyChEBIChEBIIdentifiers - -Faulty ChEBI identifiers detected: 2 -``` -http://classic.wikipathways.org/instance/WP4906_r135034 CoA has a faulty identifier ChEBI:57287 (it should be a number or start with "CHEBI:") -http://classic.wikipathways.org/instance/WP4906_r135034 S-palmitoyl-L-cysteine residue of a protein has a faulty identifier ChEBI:74151 (it should be a number or start with "CHEBI:") -``` - - + ## Data nodes without an identifier -The following DataNodes have no identifier: 2 +The following DataNodes have no identifier: 3 -* [http://classic.wikipathways.org/instance/WP4906_r135034](http://classic.wikipathways.org/instance/WP4906_r135034) http://rdf.wikipathways.org/Pathway/WP4906_r135034/DataNode/b40ed () -* [http://classic.wikipathways.org/instance/WP4906_r135034](http://classic.wikipathways.org/instance/WP4906_r135034) http://rdf.wikipathways.org/Pathway/WP4906_r135034/DataNode/e2c2d () +* [http://classic.wikipathways.org/instance/WP4906_r135075](http://classic.wikipathways.org/instance/WP4906_r135075) http://rdf.wikipathways.org/Pathway/WP4906_r135075/DataNode/ae61e () +* [http://classic.wikipathways.org/instance/WP4906_r135075](http://classic.wikipathways.org/instance/WP4906_r135075) http://rdf.wikipathways.org/Pathway/WP4906_r135075/DataNode/b40ed () +* [http://classic.wikipathways.org/instance/WP4906_r135075](http://classic.wikipathways.org/instance/WP4906_r135075) http://rdf.wikipathways.org/Pathway/WP4906_r135075/DataNode/e2c2d () More details at [https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier](https://www.wikipathways.org/WikiPathwaysCurator/DataNodesTests/dataNodesWithoutIdentifier) - - -## GeneTests.entrezGeneIdentifiersNotNumber - -Entrez Gene identifiers that are not numbers: 1 -``` -http://classic.wikipathways.org/instance/WP4906_r135034 -> , unkown - ``` - - - -## GeneralTests.emptyLabelOfNodeWithIdentifier - -Data nodes with an identifier but empty label: 1 -``` -https://identifiers.org/ncbigene/unkown (), http://classic.wikipathways.org/instance/WP4906_r135034 -``` - ## InteractionTests.interactionsWithLabels Interactions found that involve Labels: 1 ``` -http://classic.wikipathways.org/instance/WP4906_r135034 "unknown function" with graphId f7b7a +http://classic.wikipathways.org/instance/WP4906_r135075 "unknown function" with graphId f7b7a ```