Include some more examples with other features in the README? (Enhancement)

[mantzaris]

Would it be possible to include in the README.md a set of examples where other features of the ssw functionality can be interfaced with this wrapper? eg. the library allows multiple query and target sequences to be used at a time in a function call, "The input files can be in FASTA or FASTQ format. Both target and query files can contain multiple sequences. Each sequence in the query file will be aligned with all sequences in the target file. If your target file has N sequences and your query file has M sequences, the results will have MN alignments.*"

Also, can you demonstrate how the score penalties can be set when performing an alignment?