From 43e710404aefed8b1ee9ef2cf5dd27548ef495d7 Mon Sep 17 00:00:00 2001
From: Logan Drescher <drescher@uchc.edu>
Date: Tue, 16 Jan 2024 14:26:27 -0500
Subject: [PATCH] fixing tar pathing

---
 .github/workflows/cd.yml | 53 +++++++++++++++++++++-------------------
 1 file changed, 28 insertions(+), 25 deletions(-)

diff --git a/.github/workflows/cd.yml b/.github/workflows/cd.yml
index bc9a6b7f..3ea6c29a 100644
--- a/.github/workflows/cd.yml
+++ b/.github/workflows/cd.yml
@@ -285,31 +285,34 @@ jobs:
           ../../.github/scripts/install_name_tool_macos.sh
           tar czvf ../upload/mac64.tgz --dereference .
 
-#      - name: handle shared object paths for Windows native build
-#        if: matrix.platform == 'windows-latest'
-#        shell: msys2 {0}
-#        run: |
-#          cd build/bin
-#          ls *_x64   | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          chmod u+w,+x *
-#          tar czvf ../linux64.tgz --dereference .
-#          cd ../..
-#          # fi
-
-#      - name: handle shared object paths for Linux native build
-#        if: matrix.platform == 'ubuntu-latest'
-#        shell: bash
-#        run: |
-#          cd build/bin
-#          ls *_x64   | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
-#          chmod u+w,+x *
-#          tar czvf ../linux64.tgz --dereference .
-#          cd ../..
-#          # fi
+      - name: handle shared object paths for Windows native build
+        if: matrix.platform == 'windows-latest'
+        shell: msys2 {0}
+        run: |
+          mkdir build/upload
+          cd build/bin
+          rm hello_test TestVCellStoch testzip ziptool || true
+          ls *_x64   | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          chmod u+w,+x *
+          tar czvf ../upload/win64.tgz --dereference .
+          cd ../..
+          # fi
+
+      - name: handle shared object paths for Linux native build
+        if: matrix.platform == 'ubuntu-latest'
+        shell: bash
+        run: |
+          mkdir build/upload
+          cd build/bin
+          rm hello_test TestVCellStoch testzip ziptool || true
+          ls *_x64   | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          ls *.so    | awk '{print $1}' | xargs -I '{}' ldd '{}' | grep "=> /" | grep -v "build" | awk '{print $3}' | xargs -I '{}' cp -vn '{}' . || true
+          chmod u+w,+x *
+          tar czvf ../upload/linux64.tgz --dereference .
+          cd ../..
 
       - name: Upload Macos binaries
         if: matrix.platform == 'macos-latest'