From 1d6621b973a5e15d4180d5f0c19bb090ae1665aa Mon Sep 17 00:00:00 2001 From: Vimalkumar Velayudhan Date: Mon, 30 Nov 2015 15:48:35 +0000 Subject: [PATCH] Release 0.2.5 --- HISTORY.rst | 6 ++++++ MANIFEST.in | 2 ++ riboplot/__init__.py | 2 +- setup.py | 4 ++-- 4 files changed, 11 insertions(+), 3 deletions(-) diff --git a/HISTORY.rst b/HISTORY.rst index 85c51c4..6f5f43e 100644 --- a/HISTORY.rst +++ b/HISTORY.rst @@ -2,6 +2,12 @@ History ======= +0.2.5 (2015-11-30) +------------------ +* Bugfix: Use known versions of libraries as dependencies in setup.py. + Otherwise, pip installs latest versions which haven't been tested. +* Remove Codons label, change START to AUG [riboplot]. + 0.2.4 (2015-11-25) ------------------ * Bugfix: ribocount now returns correct read counts if an offset is provided. diff --git a/MANIFEST.in b/MANIFEST.in index 678dd05..5c8e1ef 100644 --- a/MANIFEST.in +++ b/MANIFEST.in @@ -9,4 +9,6 @@ recursive-include docs _static/* recursive-include docs _styles/fonts/*.ttf recursive-include docs _templates/*.html +prune docs/_build + include tests/README.rst diff --git a/riboplot/__init__.py b/riboplot/__init__.py index 9650fd6..b588ab9 100644 --- a/riboplot/__init__.py +++ b/riboplot/__init__.py @@ -2,4 +2,4 @@ __author__ = 'Vimalkumar Velayudhan' __email__ = 'vimalkumarvelayudhan@gmail.com' -__version__ = '0.2.4' +__version__ = '0.2.5' diff --git a/setup.py b/setup.py index 4316cf6..0211b7d 100644 --- a/setup.py +++ b/setup.py @@ -14,7 +14,7 @@ with open('HISTORY.rst') as history_file: history = history_file.read().replace('.. :changelog:', '') -requirements = ['matplotlib', 'pysam', 'mock==1.0.1'] +requirements = ['matplotlib<=1.4.3', 'pysam<=0.8.3', 'mock==1.0.1'] test_requirements = [ # TODO: put package test requirements here @@ -22,7 +22,7 @@ setup( name='riboplot', - version='0.2.4', + version='0.2.5', description="Plot read counts of RiboSeq data from BAM format alignment files", long_description=readme + '\n\n' + history, author="Vimalkumar Velayudhan",