diff --git a/.Rbuildignore b/.Rbuildignore
index d554f5c81..6c202dfd9 100644
--- a/.Rbuildignore
+++ b/.Rbuildignore
@@ -1,2 +1,6 @@
*.tws
*.md
+^.*\.Rproj$
+^\.Rproj\.user$
+^LICENSE\.md$
+^_notes$
diff --git a/.gitignore b/.gitignore
index 86226d321..014f83228 100644
--- a/.gitignore
+++ b/.gitignore
@@ -1 +1,3 @@
*.tws
+.Rproj.user
+_notes
diff --git a/DESCRIPTION b/DESCRIPTION
index 1a7f8889e..f08b292ef 100644
--- a/DESCRIPTION
+++ b/DESCRIPTION
@@ -1,15 +1,15 @@
Package: curatedPCaData
-Title: curated Prostate Cancer Data
+Title: Curated Prostate Cancer Data
Version: 0.0-2
Date: 2020-04-03
-Authors@R: person("First", "Last", email = "first.last@example.com",
+Authors@R: person("Daniel", "Laajala", email = "teelaa@utu.fi.com",
role = c("aut", "cre"))
Maintainer:
-Description: Foo Bar
+Description: A selection of annotated prostate cancer datasets.
Depends: R (>= 3.1.0), S4Vectors (>= 0.23.18)
Imports: cgdsr, annotate, org.Hs.eg.db, biomaRt, GenomicFeatures, GEOquery
Suggests:
-License: GPL (>= 3)
+License: GPL-3
Encoding: UTF-8
RoxygenNote: 6.1.1
VignetteBuilder: R.rsp
diff --git a/README.Rmd b/README.Rmd
new file mode 100644
index 000000000..ddc002e59
--- /dev/null
+++ b/README.Rmd
@@ -0,0 +1,42 @@
+---
+output: github_document
+---
+
+```{r setup, include = FALSE}
+
+knitr::opts_chunk$set(
+ collapse = TRUE,
+ fig.path = "man/figures/README-",
+ out.width = "100%"
+)
+
+```
+
+# curatedPCaData
+
+
+
+
+## Overview
+
+`curatedPCaData` is a collection of publically available and annotated data resources
+concerning prostate cancer.
+
+## Installation
+
+You can install `curatedPCaData` from github with:
+
+```r
+# install.packages("devtools")
+devtools::install_github("Syksy/curatedPCaData")
+```
+
+
+
+## Usage
+
+```{r, eval=FALSE}
+library(curatedPCaData)
+
+# insert basic example here
+```
\ No newline at end of file
diff --git a/README.md b/README.md
index a901b11d0..690df5d6c 100644
--- a/README.md
+++ b/README.md
@@ -1,2 +1,30 @@
-# curatedPCaData
-Curated Prostate Cancer Data R-package / pipelines / workspaces
+
+# curatedPCaData
+
+
+
+
+
+## Overview
+
+`curatedPCaData` is a collection of publically available and annotated
+data resources concerning prostate cancer.
+
+## Installation
+
+You can install `curatedPCaData` from github with:
+
+``` r
+# install.packages("devtools")
+devtools::install_github("Syksy/curatedPCaData")
+```
+
+
+
+## Usage
+
+``` r
+library(curatedPCaData)
+
+# insert basic example here
+```
diff --git a/curatedPCaData.Rproj b/curatedPCaData.Rproj
new file mode 100644
index 000000000..21a4da087
--- /dev/null
+++ b/curatedPCaData.Rproj
@@ -0,0 +1,17 @@
+Version: 1.0
+
+RestoreWorkspace: Default
+SaveWorkspace: Default
+AlwaysSaveHistory: Default
+
+EnableCodeIndexing: Yes
+UseSpacesForTab: Yes
+NumSpacesForTab: 2
+Encoding: UTF-8
+
+RnwWeave: Sweave
+LaTeX: pdfLaTeX
+
+BuildType: Package
+PackageUseDevtools: Yes
+PackageInstallArgs: --no-multiarch --with-keep.source
diff --git a/man/figures/hex.png b/man/figures/hex.png
new file mode 100644
index 000000000..7e547d644
Binary files /dev/null and b/man/figures/hex.png differ
diff --git a/man/figures/hex_sticker.R b/man/figures/hex_sticker.R
new file mode 100644
index 000000000..1bd7d56d9
--- /dev/null
+++ b/man/figures/hex_sticker.R
@@ -0,0 +1,12 @@
+library(hexSticker)
+library(magick)
+
+# image from : https://icon-icons.com/icon/tumor-cancer-human-biology-disease-medical-health-cell/133488
+imgurl <- "man/figures/tumor.png"
+
+sticker(imgurl,
+ package="curatedPCaData", p_size=5, p_color = "#FB62AC", p_y = 0.6,
+ s_x=1, s_y=1.2, s_width=.6,
+ h_fill = "white", h_color = "#2B2671",
+ url = "https://github.com/Syksy/curatedPCaData", u_color = "#FB62AC", u_size = 1,
+ filename="man/figures/hex.png")
\ No newline at end of file
diff --git a/man/figures/tumor.png b/man/figures/tumor.png
new file mode 100644
index 000000000..d11db815c
Binary files /dev/null and b/man/figures/tumor.png differ