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targets_ARP9.txt
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# [ CRISPRdirect | 2021-10-08 05:05:33 ]
# sequence_name:
# pam_sequence: NGG
# specificity_check: Budding yeast (Saccharomyces cerevisiae) S288C genome, sacCer3 (Apr, 2011)
# start end strand sequence GC Tm TTTT RE_sites hit_20mer hit_12mer hit_8mer
#
7 29 - CCATTTAGGCAGGACAGTATTTT 35.00 66.53 0 1 2 15
39 61 - CCCCAGATCTCAAACTACTCTCG 45.00 66.59 0 BglII 1 1 8
40 62 - CCCAGATCTCAAACTACTCTCGT 40.00 67.13 0 BglII 1 1 10
41 63 - CCAGATCTCAAACTACTCTCGTT 40.00 65.71 0 BglII 1 1 29
49 71 + CAAACTACTCTCGTTCAATTTGG 35.00 62.79 0 1 1 40
84 106 + AACATTCACTGTACCTGAGCTGG 45.00 69.97 0 1 1 6
97 119 - CCTGAGCTGGAAATACCAACACA 45.00 70.03 0 1 2 10
107 129 + AAATACCAACACAGATTTATCGG 25.00 59.85 0 1 1 55
112 134 - CCAACACAGATTTATCGGACCAC 45.00 69.31 0 1 1 15
124 146 + TATCGGACCACGAGACAAGATGG 50.00 71.93 0 1 1 39
131 153 - CCACGAGACAAGATGGTTCCTAC 50.00 70.31 0 1 1 9
149 171 - CCTACACATATCATTCAACGAAC 35.00 63.02 0 1 1 30
153 175 + CACATATCATTCAACGAACAAGG 35.00 62.49 0 1 2 18
185 207 - CCGAATTAATCAAACCAATCCAA 25.00 59.58 0 AseI 1 2 22
190 212 + TTAATCAAACCAATCCAAAATGG 25.00 59.34 0 1 1 66
199 221 - CCAATCCAAAATGGTGAAATAAT 25.00 59.82 1 1 1 44
204 226 - CCAAAATGGTGAAATAATAGACA 25.00 59.53 0 1 1 37
233 255 - CCTTTACACAATTTCTTAGACTA 25.00 59.22 0 1 1 21
328 350 - CCTCTTCTACTGATTACGCACCA 45.00 69.41 0 1 1 44
335 357 + TACTGATTACGCACCACTCTTGG 45.00 70.97 0 1 1 8
345 367 + GCACCACTCTTGGTCGCAATCGG 55.00 75.13 0 1 1 12
348 370 - CCACTCTTGGTCGCAATCGGATC 55.00 72.39 0 1 1 20
411 433 + AAACAATCTAATCCAATTGCCGG 30.00 61.48 0 MfeI 1 1 31
423 445 + CCAATTGCCGGCTTCCTTAGCGG 55.00 75.06 0 MfeI,NaeI,NgoMIV 1 1 24
423 445 - CCAATTGCCGGCTTCCTTAGCGG 60.00 79.28 0 MfeI,NaeI,NgoMIV 1 1 7
430 452 - CCGGCTTCCTTAGCGGCCACTTA 55.00 76.83 0 EaeI 1 1 26
437 459 - CCTTAGCGGCCACTTATTCTATG 45.00 70.77 0 EaeI 1 1 10
446 468 - CCACTTATTCTATGATTTCGTTG 30.00 58.13 0 1 1 29
472 494 + AATTGTTGTATTATTGATGTTGG 20.00 56.25 0 1 1 27
517 539 - CCTATTGTTGACTATGCACAATT 30.00 62.71 0 HincII 1 1 48
543 565 - CCATCTTGTCTCTTCAATACCAA 35.00 64.71 0 1 1 39
546 568 + TCTTGTCTCTTCAATACCAATGG 35.00 64.71 0 1 1 57
547 569 + CTTGTCTCTTCAATACCAATGGG 35.00 63.67 0 1 1 27
550 572 + GTCTCTTCAATACCAATGGGCGG 45.00 68.56 0 1 1 14
562 584 - CCAATGGGCGGACAGTCTATTAA 45.00 71.76 0 1 1 6
593 615 + TAAAAAAACTACTACCTCAATGG 25.00 59.64 0 1 2 23
594 616 + AAAAAAACTACTACCTCAATGGG 25.00 59.82 0 1 1 21
607 629 - CCTCAATGGGACGATGATCAGAT 45.00 68.43 0 BclI 1 1 18
639 661 + GAAAAAATCACCAATTTTTGAGG 25.00 55.65 1 1 1 65
649 671 - CCAATTTTTGAGGTGCTCAGTGA 40.00 67.97 0 1 1 90
677 699 - CCAAAAAACTATCAAGTTTCGAT 25.00 58.37 1 1 2 39
682 704 + AAACTATCAAGTTTCGATTTTGG 25.00 58.37 0 1 1 38
696 718 + CGATTTTGGAAACGAAAATGAGG 35.00 60.47 1 1 1 33
702 724 + TGGAAACGAAAATGAGGACGAGG 45.00 68.02 0 1 1 13
709 731 + GAAAATGAGGACGAGGATGAAGG 45.00 68.33 0 1 3 28
742 764 + GTTGCCGAGATTATTACAAGTGG 40.00 65.49 0 1 1 23
746 768 - CCGAGATTATTACAAGTGGTCGT 35.00 65.32 0 1 1 36
768 790 + TGATACACGTGAAGTTTTAGAGG 35.00 62.93 1 PmlI 1 1 29
781 803 + GTTTTAGAGGAAAGAGAACGTGG 40.00 64.57 1 1 1 22
816 838 + AAATGTTAAAAATAGCGACTTGG 25.00 59.26 0 1 1 6
833 855 + ACTTGGAATTCAATACTTTTTGG 25.00 59.44 1 ApoI,EcoRI 1 1 55
834 856 + CTTGGAATTCAATACTTTTTGGG 25.00 57.51 1 ApoI,EcoRI 1 2 57
844 866 + AATACTTTTTGGGATGAAAAAGG 25.00 59.56 1 1 1 110
862 884 + AAAGGTAACGAAATTAAAGTTGG 25.00 59.18 0 1 1 35
880 902 + GTTGGTAAGCAAAGATTCCAAGG 40.00 67.41 0 1 1 25
897 919 - CCAAGGATGTAATAACCTGATTA 30.00 63.27 0 1 2 9
912 934 - CCTGATTAAGAATATTTCTAATC 20.00 53.05 0 SspI 1 1 17
919 941 + AAGAATATTTCTAATCGTGTAGG 25.00 58.69 0 SspI 1 1 11
968 990 + TTAACAAAGCTAAAGCCGTTTGG 35.00 66.32 0 1 1 14
969 991 + TAACAAAGCTAAAGCCGTTTGGG 35.00 66.32 0 1 1 17
983 1005 - CCGTTTGGGAAAATATTATCATC 25.00 58.27 1 SspI 1 2 33
988 1010 + TGGGAAAATATTATCATCGTCGG 30.00 62.30 0 SspI 1 1 25
991 1013 + GAAAATATTATCATCGTCGGTGG 35.00 61.29 0 SspI 1 1 7
1009 1031 + GGTGGCACTACTTCAATTTCAGG 45.00 69.01 0 1 1 60
1029 1051 + AGGTTTTAAAGAAGCTTTACTGG 30.00 61.92 1 DraI,HindIII 1 1 22
1030 1052 + GGTTTTAAAGAAGCTTTACTGGG 30.00 61.92 1 DraI,HindIII 1 1 19
1068 1090 + CCATTTAATTATAGAGCCAGAGG 35.00 63.57 0 1 1 16
1068 1090 - CCATTTAATTATAGAGCCAGAGG 35.00 64.99 0 1 1 29
1084 1106 - CCAGAGGAAGAGAAGTCAAAAAG 40.00 64.64 1 1 1 43
1092 1114 + AGAGAAGTCAAAAAGAGAAGAGG 35.00 62.84 0 1 1 48
1124 1146 - CCGTATTACCAGCTGCAACAAAA 35.00 66.38 1 MspA1I,PvuII 1 1 31
1132 1154 - CCAGCTGCAACAAAAAAGAAAAG 35.00 62.62 1 MspA1I,PvuII 1 1 11
1175 1197 - CCGCATTTGTTCCAACTATAGAA 30.00 60.81 0 SfcI 1 1 41
1186 1208 - CCAACTATAGAATACGTACAGTG 35.00 63.94 0 SfcI,SnaBI 1 1 10
1206 1228 + GTGTCCTACAGTAATCAAACTGG 40.00 65.76 0 SfcI 1 1 30
1210 1232 - CCTACAGTAATCAAACTGGCTAA 35.00 66.12 0 SfcI 1 1 22
1235 1257 + ATCCAGATTACTTTCCTGAGTGG 40.00 66.78 0 1 1 11
1237 1259 - CCAGATTACTTTCCTGAGTGGAA 40.00 66.72 0 1 1 24
1246 1268 + TTTCCTGAGTGGAAGAAAAGTGG 40.00 66.24 0 1 1 98
1249 1271 - CCTGAGTGGAAGAAAAGTGGATA 40.00 66.72 1 1 1 13
1269 1291 + ATATTCAGAGATTATATTCTTGG 20.00 56.30 0 1 2 51
1270 1292 + TATTCAGAGATTATATTCTTGGG 20.00 56.08 0 1 1 46
1295 1317 - CCCAAATTGTTTCTAAGCAAATT 20.00 56.22 0 1 2 61
1296 1318 - CCAAATTGTTTCTAAGCAAATTT 20.00 56.22 0 ApoI 1 1 52
1327 1349 - CCTAAAGATACATTTTATATCAC 20.00 54.83 0 1 1 28
1351 1373 + AGAGAAAAGTATAATATGAAAGG 20.00 56.11 0 1 1 53
1356 1378 + AAAGTATAATATGAAAGGACCGG 25.00 58.48 0 1 1 17
1367 1389 + TGAAAGGACCGGCTGCTCTTTGG 55.00 76.54 0 1 1 19
1368 1390 + GAAAGGACCGGCTGCTCTTTGGG 55.00 75.66 0 1 1 34
1375 1397 - CCGGCTGCTCTTTGGGACGTGCA 60.00 77.66 0 1 1 13