From f686a6e750ec29aaa5920eff5388b8d031150abb Mon Sep 17 00:00:00 2001
From: Elizabeth Berrigan <berri104@gmail.com>
Date: Sun, 12 May 2024 17:44:35 -0700
Subject: [PATCH] add fixtures from sleap-roots-pipeline

---
 .../rice_10do/scan0K9E8BI.model123.rootcrown.slp     |  3 ---
 .../0K9E8BI.longest_3do_6nodes.predictions.slp       |  3 ---
 .../rice_3do/0K9E8BI.main_3do_6nodes.predictions.slp |  3 ---
 .../scan0K9E8BI.model123.rootcrown.predictions.slp   |  3 ---
 .../rice_3do/scan0K9E8BI.model123.rootprimary.slp    |  3 ---
 .../rice_3do/scanYR39SJX.model123.rootprimary.slp    |  3 ---
 tests/fixtures/data.py                               | 12 ++++++++++++
 7 files changed, 12 insertions(+), 18 deletions(-)
 delete mode 100644 tests/data/rice_10do/scan0K9E8BI.model123.rootcrown.slp
 delete mode 100644 tests/data/rice_3do/0K9E8BI.longest_3do_6nodes.predictions.slp
 delete mode 100644 tests/data/rice_3do/0K9E8BI.main_3do_6nodes.predictions.slp
 delete mode 100644 tests/data/rice_3do/scan0K9E8BI.model123.rootcrown.predictions.slp
 delete mode 100644 tests/data/rice_3do/scan0K9E8BI.model123.rootprimary.slp
 delete mode 100644 tests/data/rice_3do/scanYR39SJX.model123.rootprimary.slp

diff --git a/tests/data/rice_10do/scan0K9E8BI.model123.rootcrown.slp b/tests/data/rice_10do/scan0K9E8BI.model123.rootcrown.slp
deleted file mode 100644
index 9ccf240..0000000
--- a/tests/data/rice_10do/scan0K9E8BI.model123.rootcrown.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:7ac210cc614d5d77089c9218ff252bb7a3ac4fc4226da68c36d6074731b4538e
-size 98718
diff --git a/tests/data/rice_3do/0K9E8BI.longest_3do_6nodes.predictions.slp b/tests/data/rice_3do/0K9E8BI.longest_3do_6nodes.predictions.slp
deleted file mode 100644
index b7262f4..0000000
--- a/tests/data/rice_3do/0K9E8BI.longest_3do_6nodes.predictions.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:3b219e51441264716706079eb414b06c397dbc790b8f3afd1defe7dc18f14ddf
-size 34288
diff --git a/tests/data/rice_3do/0K9E8BI.main_3do_6nodes.predictions.slp b/tests/data/rice_3do/0K9E8BI.main_3do_6nodes.predictions.slp
deleted file mode 100644
index 5d81a51..0000000
--- a/tests/data/rice_3do/0K9E8BI.main_3do_6nodes.predictions.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:e74285577d7190d8c4cda7d139715930789c65af7a1ee4bc22ede27395e00321
-size 36711
diff --git a/tests/data/rice_3do/scan0K9E8BI.model123.rootcrown.predictions.slp b/tests/data/rice_3do/scan0K9E8BI.model123.rootcrown.predictions.slp
deleted file mode 100644
index 5d81a51..0000000
--- a/tests/data/rice_3do/scan0K9E8BI.model123.rootcrown.predictions.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:e74285577d7190d8c4cda7d139715930789c65af7a1ee4bc22ede27395e00321
-size 36711
diff --git a/tests/data/rice_3do/scan0K9E8BI.model123.rootprimary.slp b/tests/data/rice_3do/scan0K9E8BI.model123.rootprimary.slp
deleted file mode 100644
index b7262f4..0000000
--- a/tests/data/rice_3do/scan0K9E8BI.model123.rootprimary.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:3b219e51441264716706079eb414b06c397dbc790b8f3afd1defe7dc18f14ddf
-size 34288
diff --git a/tests/data/rice_3do/scanYR39SJX.model123.rootprimary.slp b/tests/data/rice_3do/scanYR39SJX.model123.rootprimary.slp
deleted file mode 100644
index 8214dfa..0000000
--- a/tests/data/rice_3do/scanYR39SJX.model123.rootprimary.slp
+++ /dev/null
@@ -1,3 +0,0 @@
-version https://git-lfs.github.com/spec/v1
-oid sha256:4a035b8679865f82547e4c68ada36c6139f5b219f4fac645717ea5b3e311a55d
-size 34288
diff --git a/tests/fixtures/data.py b/tests/fixtures/data.py
index 0411e6a..ba8f2a8 100644
--- a/tests/fixtures/data.py
+++ b/tests/fixtures/data.py
@@ -25,6 +25,18 @@ def canola_lateral_slp():
     return "tests/data/canola_7do/919QDUH.lateral.predictions.slp"
 
 
+@pytest.fixture
+def rice_pipeline_output_folder():
+    """Path to the folder with the output of the rice pipeline."""
+    return "tests/data/rice_3do_pipeline_output"
+
+
+@pytest.fixture
+def rice_10do_pipeline_output_folder():
+    """Path to the folder with the output of the 10 day old rice pipeline."""
+    return "tests/data/rice_10do_pipeline_output"
+
+
 @pytest.fixture
 def rice_folder():
     """Path to a folder with the predictions for 3 day old rice."""