README.md

Tutorials on evolutionary genomics

• ABBA BABA statistics using genome wide SNP data
  A tutorial that explores the "ABBA BABA" D and f statistics, and how these can be applied using genome-scale SNP data, including significance testing using the block jackknife.

• ABBA BABA analysis in sliding windows
  A tutorial on applying "ABBA BABA" statistics (specifically f_d Martin et al. 2015 in sliding windows to quantify variation in the extent of introgression across the genome.

• topology_weighting
  A tutorial on topology weighting using Twisst to explore evolutionary relationships across teh genome, as described in Martin & Van Belleghem 2017.