From b09daa1a26d5e786fa07ced1e691ec9f8da2cf47 Mon Sep 17 00:00:00 2001
From: Isaac Virshup <ivirshup@gmail.com>
Date: Wed, 7 Feb 2024 12:34:15 +0000
Subject: [PATCH 1/2] Set 30min timeout for GPU tests

---
 .github/workflows/test-gpu.yml | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/.github/workflows/test-gpu.yml b/.github/workflows/test-gpu.yml
index 104396116..092a2880e 100644
--- a/.github/workflows/test-gpu.yml
+++ b/.github/workflows/test-gpu.yml
@@ -35,9 +35,14 @@ jobs:
     name: GPU Tests
     needs: check
     runs-on: "cirun-aws-gpu--${{ github.run_id }}"
+    # Setting a timeout of 30 minutes, as the AWS costs money
+    # At time of writing, a typical run takes about 5 minutes
+    timeout-minutes: 30
+
     defaults:
       run:
         shell: bash -el {0}
+
     steps:
       - uses: actions/checkout@v3
         with:

From f965aca8373885108b23a9b3ffa7b53e3d9638db Mon Sep 17 00:00:00 2001
From: Isaac Virshup <ivirshup@gmail.com>
Date: Wed, 7 Feb 2024 13:09:01 +0000
Subject: [PATCH 2/2] List pip packages too

---
 .github/workflows/test-gpu.yml | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/test-gpu.yml b/.github/workflows/test-gpu.yml
index 092a2880e..4a34e97f0 100644
--- a/.github/workflows/test-gpu.yml
+++ b/.github/workflows/test-gpu.yml
@@ -69,8 +69,10 @@ jobs:
       - name: Install AnnData
         run: pip install .[dev,test,gpu]
 
-      - name: Mamba list
-        run: micromamba list
+      - name: Env list
+        run: |
+          micromamba list
+          pip list
 
       - name: Run test
         run: pytest -m gpu --cov --cov-report=xml --cov-context=test -n 4